| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2724 |
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| Symbol | |
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| ID | 8253832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3213754 |
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| End bp | 3214347 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936372 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092987 |
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| Protein GI | 255532615 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATAA AAACAGCATT GGAAAATGAA ATAGAACTGC TGCAGCAAGC CGCTGCCGGC
GATGCCAATG CCTTTGCCCG ATTGTATAAC CATTACCGTT CGCTGGTGTA CCGTTTCATT
TACAAATACC TGAAATCGAC GCAACTAACG GATGATCTTA CCCAGGAAAT ATTTATCAAA
GTGTGGGAAA ATAAAGCAGC TTTAACAGAC CGGCAGGCTT TTAAATCGTA CTTGTTTACC
ATATCAAGGA ACCATACTTT CAATTTTTTA AAGCGGGCGG CTATAGATAC AAATGCTAAA
AGTATAATCC TCAACAACTA CACACGGCCC GATTCACTGG AAGAGGATTT GCAGACCAAA
GATTACATGG AATATCTGCA AAGCATTCTT GCTACCCTTA CACCCCAAAG CCGGGAAGTA
TTTCGCCTGT GCAGGCAGGA ATACAAAAGT TATGAGGAAG CGGCCGAAAT ACTGGGCATA
TCGCGCAGCG CAGTTAAAAA ACACATGATC AAAAGCATGA AAACTCTTGG AGATGCAGTT
AAACGCGATT TGGGGATACC ACTGGGCATT TTCCTGGCTT ATATGGTTCG CTAG
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| Protein sequence | MTIKTALENE IELLQQAAAG DANAFARLYN HYRSLVYRFI YKYLKSTQLT DDLTQEIFIK
VWENKAALTD RQAFKSYLFT ISRNHTFNFL KRAAIDTNAK SIILNNYTRP DSLEEDLQTK
DYMEYLQSIL ATLTPQSREV FRLCRQEYKS YEEAAEILGI SRSAVKKHMI KSMKTLGDAV
KRDLGIPLGI FLAYMVR
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