Gene Phep_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2712 
Symbol 
ID8253820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3190233 
End bp3191639 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content44% 
IMG OID644936360 
Producthypothetical protein 
Protein accessionYP_003092975 
Protein GI255532603 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAT TTTTTGGCCG TTTTCATCCT GTACTGGTCC ATTTACCCAT CGGTATCCTG 
TTGGTTGCCT GTCTTTTTCT GGTCATTATC CGCATTCCAA AGTTTGCTGA GCTGCGGCCT
GCGGTAACTG TCTTGTTATT TCTGGGAATG ATCAGTGCTG TGTTTGCCTG TATCACAGGT
TATTTTCTGG CAGGTAGCGG CGATTACGAA GCCGGGCTGG TCAGTAACCA CCAATGGATG
GGCATAGGGG TTGCAGCCCT CTCTGTTTTA CTGCTGATCA TCCATAAATA CGTGAATGCT
GATGGCAGCA TCCCGGTTGT TATGGCCCTG ATACTTCTTG TTCTGGTCTC AGTTACCGGC
CATTTGGGTG GCTCATTAAC ACATGGCTCA GATTATTTAA CTGCCCCCTT AAAGGGGGGC
ACTGGTGCCG GGGCAGCCAT CCCACCGATT CCTGATATCC AGGAAGCACT TGTTTACCAG
AATGCCATCC AGCCATTGCT AAAAAACAGG TGTTACAGCT GCCATGGCAG CGAAAAGCAA
AAAGGCAAAC TCCGATTAGA CCTGGAGGCC TATATTTTAA AAGGGGGCGA AGAAGGCAAT
ACCATTGTTA AAGGAAAGGC CGATGAAAGC GAACTGATCA GGCGCCTGCT ATTGCCTGGC
AGTAACGATA AGCATATGCC CCCAAAAGAA AAACCACAGC TTAGTCAGCA TGAAATTGCC
TTACTGCACT GGTGGATAAA TAATGGCGCG CAGTTTAATA AGAAAGTAAA GGAGCTTAAA
CAGCCAGACG ACATCAAGAT CGTTTTAACG GCACTGGAAA AAGGTTCGGC AGGTGCTGTT
GCCGGCAAGT TGACAGATGT TCCTGAAAAA GAAGTTGATG CCGCCAATGA AAAAGACATT
ACAGACTTAA GCAATGCAGG TGTAATGATC GTTCCTGTGG CACAGAACAG CAATTACCTG
ATGGCAAACT TTATCAATGC CCATTCAACA GCTGATAGTG TTATGGATGC TTTAAAGTCT
GTAAAAGCGC AGTTGATCTG GTTAAAATTT GAGCATAGAT CAGTAACCGA TGAAAGCCTG
AAAAATATAA AAGACTGCAA AAATCTAACG CGTTTAAGTT TGAATTACAC CCTGATAACC
GACAAGGGAC TCGAAAATCT GATACATATG GACCAGCTCC GGTCTTTAAG TCTGGTTGGC
ACAAAAGTAA GTGTAAAGGG CATAGCCAGG CTCAGTAAGC TCAAAAACCT CAAGTCCATA
TATCTTTATA AAACAGGGCT TCAAAGAACG GATTGGAATA CCCTGAAAAA ACTTTTTCCA
AAAACAATTA TTGATTCTGG GAATTATCAG GTGCCAACTT TACCAATGGA TACAATAGAG
GTGAAGGCCC CAACAGGCAA ATCATAA
 
Protein sequence
MLEFFGRFHP VLVHLPIGIL LVACLFLVII RIPKFAELRP AVTVLLFLGM ISAVFACITG 
YFLAGSGDYE AGLVSNHQWM GIGVAALSVL LLIIHKYVNA DGSIPVVMAL ILLVLVSVTG
HLGGSLTHGS DYLTAPLKGG TGAGAAIPPI PDIQEALVYQ NAIQPLLKNR CYSCHGSEKQ
KGKLRLDLEA YILKGGEEGN TIVKGKADES ELIRRLLLPG SNDKHMPPKE KPQLSQHEIA
LLHWWINNGA QFNKKVKELK QPDDIKIVLT ALEKGSAGAV AGKLTDVPEK EVDAANEKDI
TDLSNAGVMI VPVAQNSNYL MANFINAHST ADSVMDALKS VKAQLIWLKF EHRSVTDESL
KNIKDCKNLT RLSLNYTLIT DKGLENLIHM DQLRSLSLVG TKVSVKGIAR LSKLKNLKSI
YLYKTGLQRT DWNTLKKLFP KTIIDSGNYQ VPTLPMDTIE VKAPTGKS