| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2700 |
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| Symbol | |
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| ID | 8253808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3170775 |
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| End bp | 3173321 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936348 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003092963 |
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| Protein GI | 255532591 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000378241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.397467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATT TAGCGTCTGT CAAAACGCTG CGCAAACCAA ATATATTTTT ATTTACATTA
ACAGAGAAAG TGAAGAGAGT TAAGCTGGTA TTTTTTTTAG GACTGCTGAT ATGCAGTCAG
TACGTTTTTG CGCAGAACAG GCAAAGATTG ATCAACAACT GGGAATATTT AAAAGGAGAC
CTGGGCGGGA TATGGGAAGC GGTAAGACCG GTTAAGGAAG GTAATCCTGA AAGCGTTCCG
CTATGGCAGA AGGTAAGTTT GCCCCATTGC TTTAATGCAT TGGATGCGGT AGATCCGGAT
GTAAACTATT ACCAGGGCCC GGGCTGGTAC CGTACGCAGC TGGAGCTGAA AAACCCCTAT
ACAGATGGCA GGACATTGCT GCATTTTGAG GGAGCGGGAC AAAAGACGCA GGTTTATATT
TACGATAAAA AGGTTGCAGA GCATGTTGGG GGCTATGACG AATGGACGGC CGACATTACG
GATGCTGTAA AGGAATTTAA AAAAACAGCC GTTTTTCAAA CACAGTTTAA AGGCAAGGTG
CCCTTGTCCA TCAGGTGCGA TAATTCGCGT GACCTGGAGA TGATCCCTTC GGACCTGTCT
GACTTTAATG TATATGGTGG TTTATACCGG TACCTGAACC TGGTTTATGT ACCGAAGGTT
TCTGTAGATA AGATCTTTGC AGCTGCAAGC GTAGATGCAA AAGGGGTTTT GGGAAAGCTG
AGCATATCCG GCAGGCTGCT CAATCCTGAT GGTGTGGATA CAGTTTCCGT AAAAATAGAA
GTTAAAGATC CGGAGGGAAA GGTTGTAGCC AGCTGGCAAA ACCAGATCAA GGCTTTTCAT
GGCGATAAAG CCCTGTGGGA AACCAGCCTG AAAAACCCGA AACTATGGTC GCCCGAATTG
CCGCAACTAT ACACGGTTGA AACCAGCATT ACCGCTAAAG GGGATACCGA TATACAGCGG
GAAAAGATTG GTTTCAGGAA TTTTGAGTTT GTGAAAAAGG GGCCATTTAT GCTGAACGGC
AAGCGCCTGT TGTTAAGGGG GACACACCGG CATGAAGACC ATGCGGGCGT AGCGGCGGCC
ATGACAGAAG AGATGATCAC CGAAGAGATG CGGATGATGA AGGATATGGG CGTGAATTTT
ATCCGTCTGG GCCATTATCA GCAGTCGAGG ATTGTACTGG ATTTATGCGA CAGTCTGGGT
ATTTTGGTAT GGGAAGAGAT TCCCTGGTGC CGTGGCGGAC TTGGTGGCGA TACTTATAAA
GACCAGGCGC GCAGGATGCT GACCAATATG ATAGAGCAGC ATTATAACCA TGCGGCGGTG
ATGATATGGG GATTGGGGAA CGAGAACGAC TGGCCGGGTG ATTTTAATGA GTTTGATGAG
CAGAAAATCA GGACCTTTAT GAAAGAACTG AACGATCTGG CGCATAAACT GGATCCTTCA
CGTAAAACGG CCATCAGAAG GTGTGATTTT TGTAAAGACA TAGTAGATGT ATACTCGCCC
TCTATCTGGG CAGGCTGGTA CCGTGGTATT TACACGGAAT ATAAGGAAGC CTCTAAAAAG
GAATTTGACA GGGTAGACCA CTTTTTGCAT GTGGAATGGG GTGGCGACAG CCATGCCGGC
AGGCATTCGG AAAGTCCGGA TAAGGCCCTG AGTTTAGTGC AGACAGGTGT GGGGGCAGAT
GAACGGGCCG GTGATGCTTC TTTGTTTGGA GGGAGTGCCA GGGTTTCAAA GGATGGCGAC
TGGAGCGAAA GTTATATTGT TAACCTGATT GACTGGCATT TAAAAGAGCA GGAAAACATG
CCCTGGTTAA CGGGGGCGGC TTACTGGCCA TTTAAAGATT TTTCTACACC GGTGCGTCCG
GACAACCCGG TTCCTTATAT GAACCAGAAA GGGGTTATTG AGCGCGACTT CAGTAAAAAA
GAAGCTTATT ATGTATTCCA GTCGTACTGG ACCAAAGCAC CAATGGCACA TATTTACGGT
CATTCCTGGC CGGTAAGGTG GGGGGATGCC GGAGAGCAGA AAATGGTTAA AGTATATTCT
AACTGTGCCG AGGCCGAGCT TTTTATGAAC GGCAAAAGCA TGGGAAAAAA GAAAAGGAAC
AGTCAGAACT ATCCTGCGGC CGGTTTAAAA TGGATGGTGA AGTACAAGGA AGGTAAAAAC
GAGATTAAAG TAGTGGCCAC TACAAAAGAG GGCAAGACCA TTACGGACGA ACTGGTACAG
GAATACCAGA CCGCGAAATG GGATAAGCCG GCAAAGCTGG TGCTGGAAAA GGTTTCTGAG
CACGTTTCTG AAAAGGATAA CATTGCTGTG ATACAGGTTA AACTGCTGGA CAAAAACAAT
ATATTGTGTT TAGATGCCCG TGATTATGTA ACTTTTGGTT TAACCGGAGA TGGAAAACTG
ATTGACGATC AGGGTACTGC TGATGGCTCA CGTAAAGTTC AGCTGTACAA TGGCCGGGCT
GTGATCAGCG TAAACCTGAA TAAAGGCAAA AGTGTAGCAA GCGTTAAGGC AGATGGCATA
CCTTCTGCAT TTGTAGAACT TAAATGA
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| Protein sequence | MTNLASVKTL RKPNIFLFTL TEKVKRVKLV FFLGLLICSQ YVFAQNRQRL INNWEYLKGD
LGGIWEAVRP VKEGNPESVP LWQKVSLPHC FNALDAVDPD VNYYQGPGWY RTQLELKNPY
TDGRTLLHFE GAGQKTQVYI YDKKVAEHVG GYDEWTADIT DAVKEFKKTA VFQTQFKGKV
PLSIRCDNSR DLEMIPSDLS DFNVYGGLYR YLNLVYVPKV SVDKIFAAAS VDAKGVLGKL
SISGRLLNPD GVDTVSVKIE VKDPEGKVVA SWQNQIKAFH GDKALWETSL KNPKLWSPEL
PQLYTVETSI TAKGDTDIQR EKIGFRNFEF VKKGPFMLNG KRLLLRGTHR HEDHAGVAAA
MTEEMITEEM RMMKDMGVNF IRLGHYQQSR IVLDLCDSLG ILVWEEIPWC RGGLGGDTYK
DQARRMLTNM IEQHYNHAAV MIWGLGNEND WPGDFNEFDE QKIRTFMKEL NDLAHKLDPS
RKTAIRRCDF CKDIVDVYSP SIWAGWYRGI YTEYKEASKK EFDRVDHFLH VEWGGDSHAG
RHSESPDKAL SLVQTGVGAD ERAGDASLFG GSARVSKDGD WSESYIVNLI DWHLKEQENM
PWLTGAAYWP FKDFSTPVRP DNPVPYMNQK GVIERDFSKK EAYYVFQSYW TKAPMAHIYG
HSWPVRWGDA GEQKMVKVYS NCAEAELFMN GKSMGKKKRN SQNYPAAGLK WMVKYKEGKN
EIKVVATTKE GKTITDELVQ EYQTAKWDKP AKLVLEKVSE HVSEKDNIAV IQVKLLDKNN
ILCLDARDYV TFGLTGDGKL IDDQGTADGS RKVQLYNGRA VISVNLNKGK SVASVKADGI
PSAFVELK
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