| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2683 |
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| Symbol | |
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| ID | 8253791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3143483 |
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| End bp | 3147859 |
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| Gene Length | 4377 bp |
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| Protein Length | 1458 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936331 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003092946 |
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| Protein GI | 255532574 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.858123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.311516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA GGATTATTTT ATTCTCCATA AAGAATAAAT TAGCAATAGG CATTATGACC
CTGGCCCTGG TGGTCTGGGG AATCTATTCC TTAACACAAT TACCGATTGA TGCGGTACCC
GACATTACCA ATAACCAGGT ACAGATCATT TCACAGGCCC CTAGCTTAGG TGCCCAGGAA
GTAGAACAGT TCATCACTGC GCCTATCGAA CTGGGCATGG CCAATATCCC CAATGTGATA
GAGAAACGGT CCATATCCCG CTCCGGTATA TCCGTCATCA CCATTGTTTT TGAAGACGAT
ACCGATATTT ACTGGGCCCG GCAACAGGTT GCTGCCCAGT TAAAAGAAGC AGAAAACAAT
ATCCCGGCCG GATTGGCAGA ACCTACCCTT GCCCCCATTA CAACCGGACT TGGTGAAATT
TACCAATATG TACTGCACAC AAAAAAAGGT TATGAAGACC AATATACGGC CACCGATTTA
AGGACTTTGC AGGACTGGGT GGTGCGCACC CAGCTGGCAG GCACAAAAGG GGTAGCAGAA
GTAAGTGGCT GGGGTGGTTA TGTAAAGCAA TACGAAATTG CCCTCGACAA TGAAAAACTC
AATGCCAGTA ACGTCACCAT TTCGCAAATT TATGCCGCAC TCAAAAACAA CAATGAAAAT
ACCGGAGGCT CGTATATTGA GCAGCAAAGC AATGCCTACA CCATAAGGGG CATCGGGCAG
GTGAAATCAT TGGAGGACAT TGAAAAAATA GTGGTCAAAA ATGCCGGAGG TGTACCCCTC
CTCATCAGGG ATATCGGATC GGTACAGTTT GGAAGCGCTA CACGCTACGG TGCAGTAACC
AGAAATGGCA CCGGTGAAGT AGTGGCAGGG ATCACCCTGA TGCTGAAAGG CGAAAACTTT
AACCAGGTGA TCAAAAATGT AAAGGAAAGA ATCGCCCAGA TCCAGAAATC CTTGCCGGAA
GGTGTAGTAA TTGAACCTTA TATAGACCGT ACCGAACTGG TCGGCCGATC GATCAGTACC
GTTCAGAAAA ACCTGATCGA GGGAGCCCTC ATCGTTATAT TTGTGCTCCT GTTACTATTG
GGTAACTGGC GGGCAGGTCT GATTGTAGCC TCGGTAATTC CATTATCTAT GTTGTTCGCT
TTTGCCATGA TGCGGCTTTT TGGCGTTTCG GGTAACCTGA TGAGCCTTGG AGCAATAGAT
TTTGGCTTGA TTGTAGATGG TGCTGTAATC ATTGTAGAAG CCATTATTTT CCGGCTTACG
GAAAGTAAGC TGTTTAAAGG TACGCTGCGA CTGGATCAGC AGCAAATGGA TCAGGAGGTC
TTTACAGCCT CTTCAAAAAT AAGGGCCAGT GCTACTTTTG GCGAAATCAT CATCCTTATT
GTATACCTTC CCCTGCTCTC ACTGGTAGGG ATTGAAGGAA AGATGTTTAA ACCTATGGCC
GAAACCGTGG TTTTTGCCAT TGTAGGGGCT TTTATCCTGT CGCTAACCTA TGTACCCATG
ATCAGCGCCC TGCTCCTGAG TAAAAATACT GAACATAAAA GAACCATATC TGACCGGATC
GTGGATGGCT GCAAAAACAT CTATAAACCA CTGCTCGAAA AGGCGCTTGA GTTTAAAAAG
ATCGTCGTCA CAATTGCCAT GATCTGCTTC GCTTGCACCT TATTGTTGTT TAGCCGGATG
GGTGGTGAGT TTCTGCCACA GCTGGAGGAG GGTGATCTCG CCGTAGAGAT TGCCATGTCA
CAAGGCACCT CGCTCACACA GGTGGTAGAA ACCTTCGGCA AAGCCGAAAA GATCCTGAAG
GATAAATTCC CCGAAGTAAA ACAAGTGGTC ACACGCATTG GCAGTGCAGA AATCCCTACA
GACCCCATGC CTGTTGAAAG GGGTGATATG ATGGTGGCCA TGCTGCCGAA AAGCGAATGG
ACCTCCGCAA AAACCAAGGA AGAGATGACC GAAAAAATGG AAGCGGCACT TTCCATATTG
CCTGGCGTAA ATATAGAGAT CACCCAACCC ATGCAAATGC GCTTTAATGA GCTGATGACC
GGGGTAAGAC AGGATGTTGC TGTTAAAATT TATGGGGAAG ATCTCGATGT ACTGGCGCAG
CAGGCCGCTA AGGTTGCAAA ACTGATTGCT CCGGTAAAGG GGGTCAGCGA ACCTTTTGTA
GAACAGGTTA CAGGGTTGCC ACAGGTGGTG GTCACTTACG ACAGGGATAA GATAGCACAG
TATGGGTTAA CCATTGGCGA CATCAACAAC ATTTTAAAGA CTGCTTTCGC AGGTGATGTA
GCCGGAGTTG TATTTGAAGG GGAAAAGCGT TTCGACATGG TAGTTCGCCT GCAGCGCGAC
CTTCGCGAAA ACATTTCCAG TATTGAGAAT TTATATATCC CACTCCCCTC AGGCAATAAA
GTACCCTTAA ACCAGGTGGC AAAAATAGAG CTGAAGGATG CCCCTGCCCA GATATCCCGT
GAAGATGGGA AAAGACGAAT CTATGTAGGT TTTAATGTGA AAGGCAGGGA TGTGGAACGC
ACAGTAGCGG AAATACAACA GGTACTGGAT GCCAGACTGA AGCTTCCTCC AGGGTATTAC
CTTACTTACG GCGGACAGTT CCAAAACCTG AAGGAAGCTA AAAACAGGCT TTCTGTAGCC
GTTCCTGTAG CCATGCTCCT CATCCTTGGT CTGCTTTATT TTACTTTCAG GTCCGTCAGC
CAAACCATTC TCATTTTTAC CGCAGTCCCT CTATCTGCCA TAGGCGGGGT ATTGGCCTTA
ATGCTCAGGG GCATGCCTTT CAGCATCTCG GCAGGCGTTG GTTTTATTGC CTTGTTCGGG
GTAGCGGTAT TGAATGGTAT TGTGCTCATC TCTTATTTTA ACCAGCTTAA AGAAGAAGGG
ATCACCGATG TTTATAAACG CGTAATGCAG GGTACGGCAG TCAGGTTAAG GCCCGTAATT
ATGACTGCAG CAGTCGCCTC ACTGGGATTT TTACCCATGG CCCTTTCCGG AGGTGCGGGG
GCTGAAGTAC AAAAACCACT GGCCACAGTG GTAATTGGCG GGCTGCTTTC AGCAACTTTA
CTCACTTTAT TTGTACTGCC CTGCCTGTAC ATCCTGGTTA CTGACCGCAA AAAAATACAA
AATAATATCA TGAAGCCTTT AGTGATCATC TTTCTTTTAT TCGGAGGATT GGCATTTACC
AACCAGGCAA AAGCTCAGCA AGCACCCCTC TCGGCAGACA GTGCCGTAGC ATTGGCATTA
AAAAACAATT TGCAGCTGAA ATCTGCCGGT TTGTCTGTGA GCCAATCGAA AGCCAGACAA
AAAACAGCTT TTGACCCGTC TAAAACTGCT TTCACCATCT CACAGGATCC TACCGGCGGG
GGCAGTAACG ACAACTCCAT TTCCGTCTCC CAAAACTTTG CCTGGCCCGG ATTTTATAAA
AATCAAAAAA GGGTGCTGAG CAGCGAGACT GGTTTAATGG AAAAATCAGC AGATTATACC
CGTGCCGAGA TCAGCAGGGA TACCAGACTT GCCTATTATC ATTTGCTTTA CAGCATAAAT
ATGCTAAAGG TACTGGAGCT GCAGGATAGT ATTTATAAGC ATTTTATCCG TAAATCTGAA
TTGAGGTACA AGGTTGGGGA AACTTCCAAT CTTGAGCTGA TCACCGCCAG AAACAAATAC
CAGGAGGTGC AGGCACTGAA AAAATCGGCA GCAGCAAACC TGGCTACCCA GCAGCTCAAC
CTTCAGCAGC TGCTGAACTT AAATACCGGT ATCCTCCCTT CAGAAAAAAA ACTCCCCATC
CTTACTTTAA CACAGGATGG AACGGGTACC GAAAATACAG CTGCAGGCAA TCTGCTCAAT
GCTGTTTACC AGCAGCAGGT CGAGATTGCC AAAGCAAAAG TAGAGCTGGA GCGTTCGCGT
ACCATGCCCG ATCTGACATT TGGCTATGCG CAACAGTTTG TCATCAAATC TTTCGACCCC
GCAAATATCG GACGTACCTA TACGCCCGGC ACCAGGATAG CTGGCCTGCA GTTGGGCATT
GCAGTCCCCC TCTTTAATGG TGCAGGACGG GCAAGGATAA ACAATGAAAA GATTGCTGCA
CAGATCGCCG AAACAGATTA TCAGCGCATA CAAAACCAGC TGAACACACA ATACCAGCAG
GAAATGCAAA ATTATGCCCA GCATAAAGCA ATGGCCGATT ATTTTACCAC CGAAGGGTTA
AAACAGGCAG AAGAACAAAT CCGAATTGCA CAGGTATCCT ATGACCTTGG AGAGATTGGC
TATATCGAAT TCATACAGAA CATGTCACTC GCCGTACAAA GCAAGCTCAA TTATCTTCAA
ACGGTTAACC AACTGAACCA ATCCGTTATT CAATTACAAT TTTTAAAAGG GAATTAA
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| Protein sequence | MFNRIILFSI KNKLAIGIMT LALVVWGIYS LTQLPIDAVP DITNNQVQII SQAPSLGAQE
VEQFITAPIE LGMANIPNVI EKRSISRSGI SVITIVFEDD TDIYWARQQV AAQLKEAENN
IPAGLAEPTL APITTGLGEI YQYVLHTKKG YEDQYTATDL RTLQDWVVRT QLAGTKGVAE
VSGWGGYVKQ YEIALDNEKL NASNVTISQI YAALKNNNEN TGGSYIEQQS NAYTIRGIGQ
VKSLEDIEKI VVKNAGGVPL LIRDIGSVQF GSATRYGAVT RNGTGEVVAG ITLMLKGENF
NQVIKNVKER IAQIQKSLPE GVVIEPYIDR TELVGRSIST VQKNLIEGAL IVIFVLLLLL
GNWRAGLIVA SVIPLSMLFA FAMMRLFGVS GNLMSLGAID FGLIVDGAVI IVEAIIFRLT
ESKLFKGTLR LDQQQMDQEV FTASSKIRAS ATFGEIIILI VYLPLLSLVG IEGKMFKPMA
ETVVFAIVGA FILSLTYVPM ISALLLSKNT EHKRTISDRI VDGCKNIYKP LLEKALEFKK
IVVTIAMICF ACTLLLFSRM GGEFLPQLEE GDLAVEIAMS QGTSLTQVVE TFGKAEKILK
DKFPEVKQVV TRIGSAEIPT DPMPVERGDM MVAMLPKSEW TSAKTKEEMT EKMEAALSIL
PGVNIEITQP MQMRFNELMT GVRQDVAVKI YGEDLDVLAQ QAAKVAKLIA PVKGVSEPFV
EQVTGLPQVV VTYDRDKIAQ YGLTIGDINN ILKTAFAGDV AGVVFEGEKR FDMVVRLQRD
LRENISSIEN LYIPLPSGNK VPLNQVAKIE LKDAPAQISR EDGKRRIYVG FNVKGRDVER
TVAEIQQVLD ARLKLPPGYY LTYGGQFQNL KEAKNRLSVA VPVAMLLILG LLYFTFRSVS
QTILIFTAVP LSAIGGVLAL MLRGMPFSIS AGVGFIALFG VAVLNGIVLI SYFNQLKEEG
ITDVYKRVMQ GTAVRLRPVI MTAAVASLGF LPMALSGGAG AEVQKPLATV VIGGLLSATL
LTLFVLPCLY ILVTDRKKIQ NNIMKPLVII FLLFGGLAFT NQAKAQQAPL SADSAVALAL
KNNLQLKSAG LSVSQSKARQ KTAFDPSKTA FTISQDPTGG GSNDNSISVS QNFAWPGFYK
NQKRVLSSET GLMEKSADYT RAEISRDTRL AYYHLLYSIN MLKVLELQDS IYKHFIRKSE
LRYKVGETSN LELITARNKY QEVQALKKSA AANLATQQLN LQQLLNLNTG ILPSEKKLPI
LTLTQDGTGT ENTAAGNLLN AVYQQQVEIA KAKVELERSR TMPDLTFGYA QQFVIKSFDP
ANIGRTYTPG TRIAGLQLGI AVPLFNGAGR ARINNEKIAA QIAETDYQRI QNQLNTQYQQ
EMQNYAQHKA MADYFTTEGL KQAEEQIRIA QVSYDLGEIG YIEFIQNMSL AVQSKLNYLQ
TVNQLNQSVI QLQFLKGN
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