| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2665 |
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| Symbol | |
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| ID | 8253773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3117336 |
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| End bp | 3118205 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936313 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092928 |
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| Protein GI | 255532556 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.145777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.44047 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAT TTACAATATC ACCTTCAATT GCTAAAAGAG ATTCGGATGT GGTAGAAAGC
TATTTAAGTG AGATAGGAAG GATTAGTTTG ACAGATCCTG AAGAAGAGTT CAGGTTGGTG
TCAGCGATCC GTAACGGAGA TCAGGAAGCG TTGCACAGGC TTATAAAGGG AAATCTCCGT
TTTGTGGTGT CCGTAGCAAA AAAATATCAG GATAAAGGAC TAAAGCTGGG TGATCTGATC
AACGAAGGCA ATATCGGACT GATTAAAGCT GCACATCGCT TTGATGCAAC CAGAGGTTTT
AAGTTTATCA CTTTCGCCGT ATGGTGGGTC CGTCAGGCAA TTTTGCAGGC CATTGCCGAA
CAGCGACGTC TGATCCGGTT ACCTGGCAAT CAGCTGCTGG GGATAAGCAG GCTTAATCAG
GCTGTATTAA AACTGGAGCA ACAGCTAGAG AGAATGCCTA CAGTTGAAGA ACTGGCAGTT
TATACGGGAT TTACAGTGGA CAAAGTAATG GATTATACGG CTAATGCCGC TTTTACTTAT
TCGTTAGATG ATGTAATTAA GGAAGAATCA GGAAGTACAT TAATGGAAGT AATTGCAGAC
GAAGCTACAC ATCAAACCGA TCATTTTACA TTGGCCGCAT CCCTGTCAAC GGATCTGAAC
AGGGCATTGG ATATTTTATC AAAAAGGGAA CAAAAGATCA TTATATTATT TTATGGACTG
AACGGATATC CGCAAACTGC AATTGAGGAT ATGCAGAAGA TTTTAAAACT TAGTAAAGAA
CGAATCAGAC AGCTCAAAGA CAAAGCGCAT AAAACACTGG GTTTAAATTG TGGTGTGATG
CTGAACGATT ATTTTTCAAG GAATGTTTAA
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| Protein sequence | MKRFTISPSI AKRDSDVVES YLSEIGRISL TDPEEEFRLV SAIRNGDQEA LHRLIKGNLR
FVVSVAKKYQ DKGLKLGDLI NEGNIGLIKA AHRFDATRGF KFITFAVWWV RQAILQAIAE
QRRLIRLPGN QLLGISRLNQ AVLKLEQQLE RMPTVEELAV YTGFTVDKVM DYTANAAFTY
SLDDVIKEES GSTLMEVIAD EATHQTDHFT LAASLSTDLN RALDILSKRE QKIIILFYGL
NGYPQTAIED MQKILKLSKE RIRQLKDKAH KTLGLNCGVM LNDYFSRNV
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