Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2597 |
Symbol | |
ID | 8253704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3035687 |
End bp | 3036853 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936247 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003092863 |
Protein GI | 255532491 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.598556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.375027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CTGAGATCAA AACCTTTATT TGCCATTCAT ACCGAACAAA CTGGGTGTTT GTAAAAGTAA TTACTGATTC GGGCCTGCAT GGCGTAGGCG AGGCAACACT GGAAATGAAA GAATTGACTG TGTTGCAGGC CGTAAATGAA TTAAAAAGAT ATTTAATAGG AAAAGACCCT CACCAGATAG AAGCCATCTG GCACGATTGC TATCGAGATG CCTACTGGCG GGGCGGGGTT GTTTTAATGA GCGCACTGGC CGCTATAGAT ATGGCTTTGT GGGACATCAA AGGCAAAGAC CTTGGTGTAC CGGTATACCA GTTGCTTGGA GGAAAGGTAA GAGATGCCGT ACCATGTTAT GCGAATGGGT GGTTTGCCCC TGCAAAAACC CCTGAAGAGT TTGCCGAAAA AGCAAAGGAG GCCGTAAAAA TCGGTTTTAA AGGTTTAAAA TGGGACCCAT TCGGATCGGC CTATATGAAC CTGACCAAAA AAGAGTTTTC TTATGCTTTG GCTTGCATTG ATGCTGTTGT TAATGCTGTA GGAACAGAGA TTGACATCTT AATTGAAGGG CATGGCCGTT TTAACATGCC AACTGCTATA AGGGTAGCCC ATGCCCTTGA AGACTTTGAC ATTACCTGGT TTGAAGAACC TATTCCCCCT GATCATATGG AGGGACTGGC GCAATTAAGA AGAAAAACCA AGGTGCCTAT TGCAGCCGGC GAGCGTCTTT ACAGCAGATG GGATTACAGA AGTTTTCTAA ACCAGGAATG CGCAGATTTT ATCCAGCCTG ATGTAAGTCA TGCTGGTGGT ATATCAGAAC TTAAAAAGAT TGCTGCTATG GCCGAATGCT ATTACATTCC GCTTTGTCCG CATAACCCGA GTGGCCCTGT AGCTAACGCT GCCACACTTC ATATTGCTGC ATCTACACCA AATTTCCATT TCCTTGAAAC GATGAGCAGT GACGTTCCTT ACCGCAATAA AATAAGTACC GAAAAAGTTG AATTTATAGA CGGAATGATG CAAATTAACA ACTTGCCCGG CCTTGGAATA GACATTAACG AAGAAGCAAT TGTGGCTTAC CCTTATGAGC CGAGGGACTT GCGACATTAC AATGGGAAGT TAACCGAAAT ACGCCCGGAA AATGCAAAGG GCTATTTTGC AAAGTAA
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Protein sequence | MKITEIKTFI CHSYRTNWVF VKVITDSGLH GVGEATLEMK ELTVLQAVNE LKRYLIGKDP HQIEAIWHDC YRDAYWRGGV VLMSALAAID MALWDIKGKD LGVPVYQLLG GKVRDAVPCY ANGWFAPAKT PEEFAEKAKE AVKIGFKGLK WDPFGSAYMN LTKKEFSYAL ACIDAVVNAV GTEIDILIEG HGRFNMPTAI RVAHALEDFD ITWFEEPIPP DHMEGLAQLR RKTKVPIAAG ERLYSRWDYR SFLNQECADF IQPDVSHAGG ISELKKIAAM AECYYIPLCP HNPSGPVANA ATLHIAASTP NFHFLETMSS DVPYRNKIST EKVEFIDGMM QINNLPGLGI DINEEAIVAY PYEPRDLRHY NGKLTEIRPE NAKGYFAK
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