| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2562 |
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| Symbol | |
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| ID | 8253669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2986750 |
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| End bp | 2988357 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936212 |
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| Product | ATP dependent DNA ligase |
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| Protein accession | YP_003092828 |
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| Protein GI | 255532456 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TCACTAAACT CATACAACAG CTGGAAATGA GCAATAAGAC CAACGACAAA
ATTGCCGCGC TGGTTGACTA TTTTAATGAA GCTGATGAAC TGGATAAACC TTATGTAATT
GCCATGTTTA CCGGAAAAAG ACCTAAAAGA CCGGTAAGCA CCGCCTTGAT CAGGCAATGG
GCCACAGCAT TGAGCGGAAT TCCGGAATGG CTTTTTTCAG AGTGTTACCA CAATGTGGGC
GACCTGAGTG AGACCATTGC CCTGGTGCTC CCGCCTGCAT CGGAACTTAG CACAAGGAAA
CTCCATGAAT GGATCAATGA GCTGGCTTTA CTGAACGGCA AAGATGATGA CGATAAAAAA
ACTTTCATTT TAAAAGCCTG GGATAGCCTG GAAACACAGG AACGTTTCAT TTTTAACAAA
CTGATATCTG GCAATTTCAG AATAGGTGTA TCCGGCAAAA TGCTGGTCAA TGCACTGGCC
AGACAAACCG GTACAGAAAG CAGTAAAATC ATGCACAGCA TTATGGGCAA ATGGGAACCC
TCGCAGATCA GTTACCAGGA CCTGATGGCA GGGGCTCATG TGAATACCGA CAGCTCCTGG
CCCTACCCTT TTTGCCTGGC ATATGCGCTT GAAGCGGAAC CAGGTGCACT GGGCGAACCT
TTGGAATGGC AGGCAGAATG GAAATGGGAT GGCATACGCG GACAAATTGT AAAACGCAAT
GGCGAGCTTT TTATCTGGTC GCGGGGCGAG GAGCTGGTAA CTGAGCAATT CCCGGAGCTG
CACTTTTTAA AAGATGAGCT GGAGGATGGA ACAGTACTGG ATGGAGAAAT ACTTTCTGTA
AAAGATGGAA AAGTACAGGC ATTTAGCTTG CTGCAACAAA GGCTAAACAG AAAAACCATC
AGTAAGGCCC AGCTAAGCGA CGCCCCGATA GGATTCTTTA CATACGACCT TTTGGAGCAT
AAGGGAAGAG ATTTAAGATC AGATGCCTTA AGTCTGCGCC GGGAACTGCT GACAAAAACT
ATTGAAGATC TGCTCACTAA ACATGTAGTG CTCCTGTCGC CGGTTATTGA ATTTAAAAGC
TGGGCGCAAC TGGCAAAACT CAGAACCATA TCGAGGGATA TCAACCGTGA AGGCATCATG
TTAAAAAAAA TGGATTCCTT ATACCACAGT GGCAGGAAGC GCGGCGACTG GTGGAAATGG
AAAATAAACC CTTATACAGT GGATACTGTA ATGATCTACG CCCAGAAAGG CAGTGGCCGC
AGGGCCAGCT TTTTTACCGA TTATACTTTT GCTGTCCGCG ATGGGGAAAA ACTGGTTACG
GTAGCAAAAG CTTATTCCGG ATTAACAGAC AAAGAAATTA AAGAAGTAAA CGCTTTTGTT
GTAAAAAATG CAATTGAAAA ATTTGGCCCG GTAAGAACTG TTAGACCGGA ACTGGTATTT
GAAATTGCAT TTGAAGGAAT AGCAGAAAGC AAAAGGCACA AAGCAGGTCT GGCCCTCAGG
TTTCCGCGTA TTGCCCGATG GAGAAAGGAC AAGAAAGCAG ATGAGATCAA TACCCTTGAT
GATTTAAAGC AATTGCTTCA GGCTACATTA TTGCCTGCCA AAGCTTAA
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| Protein sequence | MKRFTKLIQQ LEMSNKTNDK IAALVDYFNE ADELDKPYVI AMFTGKRPKR PVSTALIRQW
ATALSGIPEW LFSECYHNVG DLSETIALVL PPASELSTRK LHEWINELAL LNGKDDDDKK
TFILKAWDSL ETQERFIFNK LISGNFRIGV SGKMLVNALA RQTGTESSKI MHSIMGKWEP
SQISYQDLMA GAHVNTDSSW PYPFCLAYAL EAEPGALGEP LEWQAEWKWD GIRGQIVKRN
GELFIWSRGE ELVTEQFPEL HFLKDELEDG TVLDGEILSV KDGKVQAFSL LQQRLNRKTI
SKAQLSDAPI GFFTYDLLEH KGRDLRSDAL SLRRELLTKT IEDLLTKHVV LLSPVIEFKS
WAQLAKLRTI SRDINREGIM LKKMDSLYHS GRKRGDWWKW KINPYTVDTV MIYAQKGSGR
RASFFTDYTF AVRDGEKLVT VAKAYSGLTD KEIKEVNAFV VKNAIEKFGP VRTVRPELVF
EIAFEGIAES KRHKAGLALR FPRIARWRKD KKADEINTLD DLKQLLQATL LPAKA
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