Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2527 |
Symbol | |
ID | 8253634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2931869 |
End bp | 2933599 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936177 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_003092793 |
Protein GI | 255532421 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TTAATGTTAT AGCAATAATA ATTACCTCAG CCTTGTTTTT GGCCAGCTCA TGTTACAAAG CAGAATTAAA CCCGGGAAAT GAAGCAGAAC AGAACCGCGG GGCAACTCAA AGTACTTTGG CCCCTTTAAC AAGCCTGGCC GGAACTTCCA TTAAAGATAG CTGGGTAGCT GTATTGGATG TAACCAACGA CAAGATCAAT GTTTATGATT GTTACGCAGC AAACTGGACG GCGGCGGCAC TAAAAATGAG CTGGAGCCCT ACTACGGCAA GATTATACAG TTCGACAGAA GTAAGTGCCT GGGGAGATCC AAGAGATGTA AGGATCCGCC AAAGCCCCTG GGGTGGTGCA TGGGCTGCTG TTGGAGGTAA CCTGGCCACC ATTGCCATTC AAAGCACCGG AAAAAGGCAG TGGGCATTAA ACCTCGGGGC AGGTACCACA CCACACGGCG TGGAGCTTCT GCCCAATGGG AATATAGTAG TTGCAGCAAA GGATGGCAAT TGGGTGCGGG TATATACTTC CTCTCAGGGG GGCAGCAGTA CCAGCTACGC GCAGTTTAGC ATTACTTCGC CCACTGCAGT ACTTTGGGAT CCGGTAAATA ATGTAATCCG GGTAACCGGA ACAATTGCCG GAGCTTCTGT ATTGGCCGCC TTAACCGTGG GTGGTACTGC TGCAGCACCT ACACTTACCG AAAATGTTTC TTTACGAAGT ACATTACCAA CAGCAGGGGG ACAGGATGTG ACAGATTTTG CCGGTGATCC CAATAAATTA TGGGTATGCA GCAGTACAGG TGTATATACC TATAACAAGA CCAGCAAAGC ATTTACAGCG ATTGGAAATT ATGCCTCTAG AAGCGGTGTG AAATCCTGCG TGAACCAGAT CTCAGGCAGG TTGATCCAGG CAGACCCATC AAACGCTGCA CATATTGATT TTTGTGCAAG CAGCGGTGTA TGGCACCAAT GGCAAAACCT CGTAGGTACA TCAAATTACA GGGCAAGGAT CTGGAAATAT GACTACAGCA TTGCCGCCCA GTCTGAAGAA ATTACACTCA TGACATACAA CATTCAGTTG GCAGGCAGTG GTTTGCAGAC CATCGCAAAT GTAATTACAG CGCAAAACCC GGATCTGGTC TGCTTGCAGG AGGTAGATAA ATATACCAAC CGTTCGGGTA CTTCCATAAA CCAGGCCGAA GAGTTGGGTA AATTAACAGG AATGTATTAT TATTTCTCAA AAGCAATGGA CTTTGACGGG GGCGAATATG GTGATGCCAT ACTTTCTAAA TGGCCCTTGT ATGAAATTAC GCGTTATGTG CTGCCTGCCG GAACGGGAGA GCCAAGACAG ATGGCTGTGA TCAGGACTGA GAAAAATGGG GCCATGTTTA ATTTTGCCGG TACGCACCTG GATCATCTTG GACCTGCAGC AGGGAATAGT TTACTGCAGG CAACCGCCAT CAACAACATC GTAACTGGCA TTAGCTATCC TTTTATTCTG GGTGGTGATT TTAATGAAAT ACCTAGTTCT GTTACCATAG CCAAGTTAAA AGAAAAGTTT ACTTTAGGCT GTATAAGCAG TTGCCCGGCA ACACATCCTT CTAATGCAGC AACAAGAAGT ATAGATTATT TTATGTCACG GCCCGGAGGC TTTAACGTGT TGAGCTATGG AACAATAAAT ACACTGGCTT CAGATCATCT TCCTGTTGTG GCAACAGTAA CCCTTCAATA A
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Protein sequence | MKRINVIAII ITSALFLASS CYKAELNPGN EAEQNRGATQ STLAPLTSLA GTSIKDSWVA VLDVTNDKIN VYDCYAANWT AAALKMSWSP TTARLYSSTE VSAWGDPRDV RIRQSPWGGA WAAVGGNLAT IAIQSTGKRQ WALNLGAGTT PHGVELLPNG NIVVAAKDGN WVRVYTSSQG GSSTSYAQFS ITSPTAVLWD PVNNVIRVTG TIAGASVLAA LTVGGTAAAP TLTENVSLRS TLPTAGGQDV TDFAGDPNKL WVCSSTGVYT YNKTSKAFTA IGNYASRSGV KSCVNQISGR LIQADPSNAA HIDFCASSGV WHQWQNLVGT SNYRARIWKY DYSIAAQSEE ITLMTYNIQL AGSGLQTIAN VITAQNPDLV CLQEVDKYTN RSGTSINQAE ELGKLTGMYY YFSKAMDFDG GEYGDAILSK WPLYEITRYV LPAGTGEPRQ MAVIRTEKNG AMFNFAGTHL DHLGPAAGNS LLQATAINNI VTGISYPFIL GGDFNEIPSS VTIAKLKEKF TLGCISSCPA THPSNAATRS IDYFMSRPGG FNVLSYGTIN TLASDHLPVV ATVTLQ
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