Gene Phep_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2492 
Symbol 
ID8253599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2890910 
End bp2891968 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content45% 
IMG OID644936142 
Productresponse regulator receiver 
Protein accessionYP_003092758 
Protein GI255532386 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.570528 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0101485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAA CACGCATACT GATTATTGAA GATAATGAAG ACATCAGAGA GAGTACCGCT 
GAAATACTTG AACTGGCCAA TTACGAGGTT TTACAGGCCC ATAATGGAAA AGTAGGAATG
GAACTGGCCG CAAAACACCT GCCAGACCTG GTGCTTTGCG ACATCATGAT GCCCGAACTG
GATGGTTATG GTGTATTATA CCTCTTAAAT AAAAACCCTA AAACTGCAGC AACCCCCTTT
ATTTTTTTAA CCGCAAAAGC AGAACGGATC GACATGCGCA AAGGTATGGA AATGGGAGCA
GATGATTACC TGACCAAACC TTTTGACGAT GTAGAACTGC TGAACGCCAT TGAAAGCAGG
CTCAGTAAAA AAGACAAACA GGAACTGTTT TACAGCCAAT CGCTCGACAA ACTCAGTACC
TTGCTCGGAA GCAATTCGGG CATGGCCGAA CTCCAGAAAA TGATAGCCGA CCGCAAAGTG
CGGAATGTGA AGAAAAAACA GGTGATCTAT TATGAAGGCG ACGCTGTTCA GGGTATTTAC
CTGGTACTGA CCGGAAAGGT CAAAACCATT AAGCTGAGTG AGGATGGCCG TGAACTGCTT
ACAGGACTCT ATAACGCAGA AGAATATTTT GGTATCCCTG CACTTTTAGG GCACGAACCT
TATGCCGAAA CAGCCGAGGC CCTGGAAGAT ACCACCGTAT GCCTGTTGCC AAAAGAAATG
GTAGAAGCAT TGCTGAATAA ATACCCTGAT GTGGCCAAAG AATTTATCCG CATCCTCTCC
AATAACCTGC GCAGCAAGGA AGAACAACTG TTACAGCTGG CTTACCATTC CGTAAGAAAA
AGGATGGCCG AAGTGCTGAT CCGCTTATGC AAACAGGAAA AGTCTGGTGC TGTTTTGAAT
TTAAAAATAT CCAGGGATAA CCTGGCCGCT ATGGCTGGTA TGGCCACGGA AACCGTAAGC
CGTATCCTGA GCGATTTCAG GGACGAGGGC CTGATAGAAA AGAAAGGCAG CCAGATCATT
GTCACCGATG AACTGAAACT CCAACAGATG AAAAACTGA
 
Protein sequence
MKRTRILIIE DNEDIRESTA EILELANYEV LQAHNGKVGM ELAAKHLPDL VLCDIMMPEL 
DGYGVLYLLN KNPKTAATPF IFLTAKAERI DMRKGMEMGA DDYLTKPFDD VELLNAIESR
LSKKDKQELF YSQSLDKLST LLGSNSGMAE LQKMIADRKV RNVKKKQVIY YEGDAVQGIY
LVLTGKVKTI KLSEDGRELL TGLYNAEEYF GIPALLGHEP YAETAEALED TTVCLLPKEM
VEALLNKYPD VAKEFIRILS NNLRSKEEQL LQLAYHSVRK RMAEVLIRLC KQEKSGAVLN
LKISRDNLAA MAGMATETVS RILSDFRDEG LIEKKGSQII VTDELKLQQM KN