| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2486 |
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| Symbol | |
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| ID | 8253593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2885642 |
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| End bp | 2886442 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936136 |
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| Product | cytochrome c class I |
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| Protein accession | YP_003092752 |
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| Protein GI | 255532380 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.148102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA TTTTAATTTG GGCCTTACTG TTTGTTTCGG TAAGTATACT GGTGGTTTCG
GTACTGGTTT TGAAGGTAAT CAAAATCTAT ATACAGCAAA GTTTACACCC CTCCCGCCTG
GCAACAGCTG AGGAAAAAGA GCAGTACAGA CTGGAGCAGG AAGGCCTACA AATGGAAAAG
CCGGAGAAAA GCAGTATCTG GACAAAATTA CTTGGTCTGA AGCCCCTCTC AGAAGAAAAA
GAACTGGTGA TGGAGCATGA GTTTGACGGC ATAGCCGAAC TGGACAACCC TACCCCTGCC
TGGTTTATGG TGCTGTTTTA TGGAACCATC TTTTTTGCCA TTGCCTATAT GGTCAATTAC
CATGTAATTG GCTGGGGCAA ATCGCAGGAG CAGGAATATG CAGCCGAACT GCAGCAGGCT
GAAGATGAAC ACATTGCTTA TCTACAGAAA CCCGGCGCCG GTACTGCCAA TAAAATTAAC
GAGAGCAATG TAGCGCAAAG TACCGATAAA GCGGTGCTGC AGGCTGGCGG GGCACTGTTC
AAAACAGCAT GCAGCCCCTG CCATGGCGAA CATGCAGAAG GCGCTGTTGG GCCAAACCTT
ACGGACGATT ACTGGCTGCA TGGCGGGAAG GTGAAGGAAA TTTTTAAGAC CATTAAATAC
GGTGTACCGG AAAAAGGGAT GATAGCCTGG GAGAAGCAGC TGAAACCCAA ACAGATCTCG
GACATTGCCA GTTACATATT GTCACTGAAA GGCAGTAACC CGGCAGGTGC AAAAGCACCT
CAGGGCAAAA AAGAAGAATA A
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| Protein sequence | MSDILIWALL FVSVSILVVS VLVLKVIKIY IQQSLHPSRL ATAEEKEQYR LEQEGLQMEK
PEKSSIWTKL LGLKPLSEEK ELVMEHEFDG IAELDNPTPA WFMVLFYGTI FFAIAYMVNY
HVIGWGKSQE QEYAAELQQA EDEHIAYLQK PGAGTANKIN ESNVAQSTDK AVLQAGGALF
KTACSPCHGE HAEGAVGPNL TDDYWLHGGK VKEIFKTIKY GVPEKGMIAW EKQLKPKQIS
DIASYILSLK GSNPAGAKAP QGKKEE
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