Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2461 |
Symbol | |
ID | 8253568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2856090 |
End bp | 2857250 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644936111 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003092727 |
Protein GI | 255532355 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAA GCTTACTCAC TTTAACCCTT GGCGGACTGG GGATTGGCAT CACAGAGTTT GTGATGATGG GCCTGTTGCC CGATATTGCA AAAGACCTCT CCATTACCAT CCCTCAGGCG GGGCACCTCA TTTCTGCTTA TGCCCTGGGT GTGGTTATCG GTGCACCTTT ACTGGTGGCC ATTGCAGGAA GCTATCCCCC AAAAAAGATA TTGATGGCCC TGATGATGAT GTTTGTGGCC TTTAACGCTT TGTCGGCTTT TTCTCCTGAT TATACCACCA TGTTTATTGC CCGCTTACTT GCGGGTTTGC CGCATGGTGC CTTTTTTGGA GTAGGGTCGG TAGTGGCCAG CCGCATTGCA GATAAAGGAA AAGAAGCTTC GGCCGTATCG CTGATGTTTG CCGGTTTAAC CATTGCCAAT GTGATCGGTG TGCCGCTGGG TACTTTTATT GGTCACAATT ATTCCTGGCG CTATACTTTC GTGATCATTG TTGTTGTAGG CTTAATTACC CTTTTGAGTC TGAAATTATG GATGCCGGCA CTGCCTGCTA CCAAGGACAG GGATCTGAAA AAAGAACTGG GTTTCTTTAA GCTGCCCGAA GCATGGCTCA TTATCCTGAT GATTGCCATA GGTACAGGAG GACTGTTTTC CTGGTACAGC TATATTGCCC CGCTTTTAAC CGATGTTTCG GGTTTTTCTG CCGATTCGAT TACTTACATC CTGGTACTGG CCGGCCTGGG TATGCTGGTT GGTAACTTTA TAGGGGGCAA GCTGGCCGAC AGGTTTTCGC CGGCAAAAGC TTCTGTTTCT TTGCTGATTG CCATGGCGGT TACCTTATTT ATTGTACATT ATATTTCTAC CAATCAGGTA CTTTCGCTGG TCATGACCTT CATTACCGGT GCGGTGGCTT TTGCCCTGGC GGCACCGATC CAGATGCTGA TGATCAAAAC GGCCAAAGGC TCGGAGATGC TTGCTGCATC TGTTAGCCAG GCCAGTTTTA ATATAGGCAA CGCTTTGGGT GCCTTTTTAG GTGGTTTGCC CCTGGCAGCT GGCTATGATT ATACTTCTCC GGTATGGGTG GGTACCTTAA TGGCCTTAAC CGGGGCCGTA TTTGCCTGGA TGCTGATTGC CCGAAATAAA AGAATGGCTT TGGCCGTTTA A
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Protein sequence | MKKSLLTLTL GGLGIGITEF VMMGLLPDIA KDLSITIPQA GHLISAYALG VVIGAPLLVA IAGSYPPKKI LMALMMMFVA FNALSAFSPD YTTMFIARLL AGLPHGAFFG VGSVVASRIA DKGKEASAVS LMFAGLTIAN VIGVPLGTFI GHNYSWRYTF VIIVVVGLIT LLSLKLWMPA LPATKDRDLK KELGFFKLPE AWLIILMIAI GTGGLFSWYS YIAPLLTDVS GFSADSITYI LVLAGLGMLV GNFIGGKLAD RFSPAKASVS LLIAMAVTLF IVHYISTNQV LSLVMTFITG AVAFALAAPI QMLMIKTAKG SEMLAASVSQ ASFNIGNALG AFLGGLPLAA GYDYTSPVWV GTLMALTGAV FAWMLIARNK RMALAV
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