Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2444 |
Symbol | |
ID | 8253551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2838965 |
End bp | 2839813 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644936094 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003092710 |
Protein GI | 255532338 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.317569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAA TAAAAATTCC TCCATTGCCC GCTGTACTCC TGGCCATCAT CAGTGTACAG GGTGGTGCGG CAATCGCCAA AGGCTTATTC CCACTGCTTG GCGCTGCGGG CACTGCTTCT GTAAGGATAG GGTTCTCGGC CATCATCCTG CTTGCAGTCT ACCGGCCAAA TTTAAAACAG CTTAGCCTGC AACAATGGAA AACAGTGAGC GCTTATGGCC TTTCACTGGG TGCTATGAAC CTTATTTTTT ACCTCGCCAT AAAAAGGATC CCGCTGGGTC TGGGTGTAAC GCTCGAATTT ATCGGACCTT TGCTCCTGGC TGTACTAGGC TCCAAGCGGG CAATTGATTT TCTATGGGTG CTCCTTGCAG CCATCGGTAT TGCCTGTATT GCACCATGGA ACGAAAAAGG TGCCGACCTG CTGGGCATGT TCCTGGCCCT GCTGGCCGGT GCGTTCTGGG CAGGCTATAT TGTACTGGGC GGCCGCATCT CCAAACTGAT GGACGGCGGC CAGGCTGTAG CCATTGGTAT GGTCTTCGCC TCAGTTGTTG TATTGCCTTT TGGTATTGCC GGTGGTATAT TGAACCACTT TAGTCCAACT ATGCTGTTCT CGGGCATTGC GCTTGCACTG CTCTCAAGCG CCATCCCTTT TACCTTAGAG ATCAACGCCC TACGAAAAAT ACCTGCCCGT ACTTTCAGTA TTTTAATGAG CCTGGAACCT GCTGTAGCAG CAATATGCGG ACTCCTCTTC CTGAATGAAA TACTTTCTTT TCATGAATGG CTGGCCGTGG CCCTGGTGAT CATCGCCAGC GCCGGGGCTA CCCTTACAAA AGGAAAGCGG AACCTTTAA
|
Protein sequence | MKTIKIPPLP AVLLAIISVQ GGAAIAKGLF PLLGAAGTAS VRIGFSAIIL LAVYRPNLKQ LSLQQWKTVS AYGLSLGAMN LIFYLAIKRI PLGLGVTLEF IGPLLLAVLG SKRAIDFLWV LLAAIGIACI APWNEKGADL LGMFLALLAG AFWAGYIVLG GRISKLMDGG QAVAIGMVFA SVVVLPFGIA GGILNHFSPT MLFSGIALAL LSSAIPFTLE INALRKIPAR TFSILMSLEP AVAAICGLLF LNEILSFHEW LAVALVIIAS AGATLTKGKR NL
|
| |