Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2362 |
Symbol | cysM |
ID | 8253469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2758480 |
End bp | 2759352 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936012 |
Product | cysteine synthase B |
Protein accession | YP_003092628 |
Protein GI | 255532256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | [TIGR01136] cysteine synthases [TIGR01138] cysteine synthase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.688309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.140538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAAATA TTGTAGAATT TGTGGGGAAT ACACCCCTTG TAGAGATCAG TAAATTGAAT CCAAACCCTG ATGTAAGGAT ATTTGCAAAG CTTGAAGGAA ATAATCCGGG TGGAAGTGTA AAAGACAGGG CCGCATTAAA CATGATCCGC AGTGCAATGG AACGTGGCGA AATTAAAAAA GGAACAAAGT TAATTGAAGC AACAAGTGGG AATACAGGTA TAGCACTGGC CATGATTGCC AGTATTTATG ACCTGGAGAT TGAGCTGGTT ATGCCGGCAA GCTCTACCCG TGAACGGACA TTGACTATGG AAGCTTTTGG GGCTAAAGTA ACTTTATTAG AATCTATAGA GGTATGCCGC GACTATGCGG AAGAACAGCG CGATAAGAAC GGCTACTTTT TACTGGACCA GTTTGCCAAT CCCGATAATT ATCTGGCCCA TTATAAAACT ACCGGACCGG AAATCTGGCG CGATACCAAT CAGCAGATTA CCCACTTTGT AAGTTCTATG GGTACTACCG GCAGTATTAT GGGCAATTCT ATGTTTTTAA AGGAACAGAA TCCCAATATA CAGATTATTG GTTGTCAGCC AACTGAAGAA TCTTCTATAC CGGGCATCAG GCGCTGGCCG GCTGCTTATC TGCCAAAAAT ATTTGATGCA AGCAGGGTAG ACCGCATAAT GGATGTTTCA CAGCAGGAAG CTACAGAGAA GGCACGTGAA CTGGCCAGAG TTGAAGGGAT TTTTGCCGGA ATGAGCAGCG GAGGAGCACT GGCCTGTTCA TTGAACTTGG CAAATGAACT GAAATCGGGC ATGATTGTAT TTATTGCTTG TGACCGTGGT GACAGATATT TGAGCAGCGA CTTGTTTGGA TAG
|
Protein sequence | MGNIVEFVGN TPLVEISKLN PNPDVRIFAK LEGNNPGGSV KDRAALNMIR SAMERGEIKK GTKLIEATSG NTGIALAMIA SIYDLEIELV MPASSTRERT LTMEAFGAKV TLLESIEVCR DYAEEQRDKN GYFLLDQFAN PDNYLAHYKT TGPEIWRDTN QQITHFVSSM GTTGSIMGNS MFLKEQNPNI QIIGCQPTEE SSIPGIRRWP AAYLPKIFDA SRVDRIMDVS QQEATEKARE LARVEGIFAG MSSGGALACS LNLANELKSG MIVFIACDRG DRYLSSDLFG
|
| |