| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2356 |
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| Symbol | |
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| ID | 8253462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2752296 |
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| End bp | 2752898 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644936005 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003092622 |
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| Protein GI | 255532250 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.240028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.522752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAATA AAACTTCTTT GGATGAGCAG GAACTTCTTT TAGCATTAAA AAAAGGAGAG
GTGGCCGCTT TTGAGGAGAT TTATAAGCGA TATAAGCAAC GCCTAGCTGT GAACTTTCTC
AAATTACTTC GATCTGAAGA ACTTGCTCAG GATGCGCTGC AGGATCTGTT TATAAAAATT
TGGACCCTAA GAAAAAGCAT AGATCCTGAT AAATCCTTTC AAGCATATCT CTTTAAAATT
GCGCAAAACA TCGTCTTTGA TTTTTACAGG AAAGCGGCAA GAGATAAAAA GATGCAGTTG
CAGATGCTTT TGGAAAATGA GGATTTCTAT AGCCATATTG AGGAAAATCT AGCAAGTAAA
GATAATATTT CACTTGTACA TGAGCTCATC GCCCAGCTTC CACCGCAGCA GCAAAAAGTT
TTTACAATGT TTAAACTAGA AGAAAAAAGC TACAAGGAAA TCAGCATTCT TTTAGGTATT
AGTCCTTCAA CTATTAATAA GCATGTTCAT CAGGCCAATA AGGTCATTAA AGCGGAGCTG
CAAAGTCGGA TAGATATTCA ATTTGTAATT ATCTTATCTG CATTACTAGC TAGCACTAAT
TAA
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| Protein sequence | MANKTSLDEQ ELLLALKKGE VAAFEEIYKR YKQRLAVNFL KLLRSEELAQ DALQDLFIKI
WTLRKSIDPD KSFQAYLFKI AQNIVFDFYR KAARDKKMQL QMLLENEDFY SHIEENLASK
DNISLVHELI AQLPPQQQKV FTMFKLEEKS YKEISILLGI SPSTINKHVH QANKVIKAEL
QSRIDIQFVI ILSALLASTN
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