| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2345 |
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| Symbol | |
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| ID | 8253451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2736265 |
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| End bp | 2739417 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935994 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003092611 |
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| Protein GI | 255532239 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.117274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA AGTTTACATT GAGTATTTTA TTACTTCTTT TTTTATGGGT CGCATCTGTT
ACGGCACAAA CAAAAGATGT AAGCGGACGG GTTACCGCCT CTGACGACGG CAGCCCTTTA
CCTGGAGTAA GCATTAAAGT TAAAGGAACC TCAACTGGCG CAACAACGAA TGCACTGGGA
AATTTCAAAA TCCAGGTATC TGGTAATAAC CAGATATTGG TGGTTAGTTA TGTTGGATAT
CTTACCAAAG AAATACCCGT TGGCAATCAG TCTATTATTA ATGTTGTACT TGCCGTGGAT
AGCAAAGAAC TGACAGAAGT AGTGGTTACT GCGCTGGGTA TTAAACGTGA CCAGAGGTCG
CTGGGGTACA CTGCACAATC GGTAAGCGGA TCGGAACTGA CTGCAAATAA ACAAACAAAT
GTGGTAAATG CGCTGCAAGG CAAAGTTGCC GGTGTAACAA TCGGTAGTAC CGGCGGTGCA
CCAGGTCAGG GTTCCAGAAT CCAGATAAGG GGGGTAAACT CAATTGACCC GGCCAGAGAT
AACCAGCCTT TATTTGTAAT TGATGGTATT TTAATGGATA ACAGCACGTC AACTCAGGGG
GATGCCTATG GTGCGAGTAA CCGGGCGGTG GACCTGAACC CCGATGATAT TGAATCTATG
AACATCCTTC GTGGCGGTGC TGCAACTGCA TTATACGGAT TGAGGGGAGC GAATGGAGTT
GTTGTAATTA CTACCAAATC CGGAAAAGCG GGTACAATTA AAATTGACTA CCAGGGCACT
TACGGATTTG AAAATGTAAA TACCATGCCT GAGATACAGG ACAAGTTTAG CCAAGGCTTT
TTAGGAGTAT ACAATAAGGA TGATTTCTGG CCTTCTTTTG GGCCGACTGT GGAAGAAGCT
AAGAAACTTG ATCCTACACA TCCCGATAAG CTGTACAACC ATTTTAAAGA TGCTTTTACC
ACCGGTAGCC AGTACAGAAA TGGGATAAGC ATTTCTGGTG GTTCTGAAAA AATTACTTTT
TTAACCTCTC TTTCTCAGAG CCAGCAAAAG GGGGTTTTGC CTTCAACAGA TTTTAAAACC
CTGCAAGGGC GCTTGAATAC TACTTTTAAG CCGAGTGAAA AGCTTAGTGC AGGTGCTTCT
ATTGCTGTAA GCAATACAGG TGGCAATAAA TATAATGCAG GAAGATATGT AGAGCAATTG
GTTTACTGGT CGCCGCGTCA TGATGTGAAT GATTATTTGG AAGACAATGG TACGATGCGG
TCGTATGGGG AGACAACCAA TCCAAGGTAT GCTGCAGAAA GTAAACGTTT TGGTGATGAT
GTACTGCGCT TGATCGGTAG CGCAAATTTA TCATATCAGC CCTTAAAATG GCTGAACTTA
AGTTATCGTG CAGGGGTTGA TACTTATCGT GATAACAGGA AAACAACCGC ACCAGGATTT
CAGGGCTTAG TTGGTGAACG TCTGGTTGAC GACAATGGTT CTGACGCTGC TCCCGGTTAT
GGTCTAATCA GCAATTATAC CAATCAGTTT CGCAGCATCA ACAGTACCTT TATTGCAAGC
GCCGAGGGAA AATTATCCAG CGATTTAACC GGTACTTTGC GACTAGGCCA CGACTTATAT
GACAGGCACA TTTACAGGAC CGCGATAGAG GGATCTGATC TAACGGTGTA TAACTTCTTT
AGCTTAAGTA ATGCAAAGGT TCTGACTGCC GGTACTTATG ATGAAAAATA CCGGTTAATG
GGTGTATTTG GTGAGCTATC GTTAAATTAT AAAGATTATT TGTATTTAAC TTTAACAGGC
AGAAATGACA AATCATCATC ACTGGCCAGT CCAAATAACA CTTTCTTTTA TCCATCGGCT
AGTTTAAGTT ATATTTTTTC TGACCATATC AAACTTCCGG CGGCAATCAG TAACGCCAAA
TTTAAATTTT CTTATGCCAG AATTGGTAAA GATGCCGCAC CATATGCAAC CAGCCTTGGA
TATGCCAATT ATACGGGCCT TCCTACAGGC TATACCGGGT TTACCAGACC TGCACAACTC
GGTGATCCAA CGCTGAAACC GGAGTTTACT GATACTTACG AAGGCGGTTT GAGCATGCGG
CTTTTCAGTA ACAGAATTGG ATTTGACGTA AATTATTACC ATTCTTTAAG TACAGACCAG
ATTATCAGTG TGCCGGTATC TACAACTACT GGTTATGCAA CTGCTGCCAT TAATGCGGGA
AGTATGCGTA ACAAAGGTAT AGAGGTAAGT GTTTCCGGCA CTCCGGTTAA AACGACTGAC
TTTTCATGGG AAACTACGTT GAATTTCTCG GCGAACCGTA ACAAAGTAGT TTCTTTAAGA
TCTGATCTTA AAGAGATTGT TGCTGCTGAT GAGCATGGTT ACTTGAACGC ACGTGTAACG
ATGAAATTGA TACCTGGTGA GGCTTACGGA ACTTTATATG GTACCGAATA TAAACGTTAT
TTCTCTCCGG AAGAAATTGC AGCAGGTTTA GATAAATCAT CTGAAGCCAG TGATCCTTCC
AGGCCGTTGT TAATTGGCGC AGATGGATTC CCCATCATTG GCGTTTCCTC GGACCAGAAA
AAACTGGGAA ATGTGCAGCC CCGTTGGATA GGCGGTTGGA ACAATACTTT CCATTATAAA
AACCTTTCTT TAAATGTGTT GTTTGATGCC AGGGTAGGCC AAGACCGCTA TAATCAACTT
GGGAATTATT TTTCTGCTTT TGGAATAGCG AAGTATACAG AGAACAGAAC TGAACATAAG
CTTTTTGAAG GTTTGCTGGC CAATGGTACC CCAAATACCA AAGAGGTATG GCTTGGTCAA
GGAATTGATC CAGCTACAGG CATTAACTAT GGAAATGGTT ACTATAGAAA TGTACATAGA
GGTGTTTCTG AAACCTTTAT CGAAGATGCT TCATGGGTAA GGCTGCGCTC TATGTCATTG
GCGTATACAC TTCCTAAAAC ATGGATAAAG AACAGCTTTG TTAAAAATGT AAATGTATCG
GTTACAGGTA ACAACTTATT TCTGTGGACT GGATATGATG GCTTTGATCC GGAAAGTACC
ACCACCAATA GTGGATCAAA TGTCGAAGGT TTTGCCGGTA TGACTTATCC TGCGGTGCGC
AGCTTCCTGT TCTCATTAAA TGTTGGTTTT TAA
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| Protein sequence | MKRKFTLSIL LLLFLWVASV TAQTKDVSGR VTASDDGSPL PGVSIKVKGT STGATTNALG
NFKIQVSGNN QILVVSYVGY LTKEIPVGNQ SIINVVLAVD SKELTEVVVT ALGIKRDQRS
LGYTAQSVSG SELTANKQTN VVNALQGKVA GVTIGSTGGA PGQGSRIQIR GVNSIDPARD
NQPLFVIDGI LMDNSTSTQG DAYGASNRAV DLNPDDIESM NILRGGAATA LYGLRGANGV
VVITTKSGKA GTIKIDYQGT YGFENVNTMP EIQDKFSQGF LGVYNKDDFW PSFGPTVEEA
KKLDPTHPDK LYNHFKDAFT TGSQYRNGIS ISGGSEKITF LTSLSQSQQK GVLPSTDFKT
LQGRLNTTFK PSEKLSAGAS IAVSNTGGNK YNAGRYVEQL VYWSPRHDVN DYLEDNGTMR
SYGETTNPRY AAESKRFGDD VLRLIGSANL SYQPLKWLNL SYRAGVDTYR DNRKTTAPGF
QGLVGERLVD DNGSDAAPGY GLISNYTNQF RSINSTFIAS AEGKLSSDLT GTLRLGHDLY
DRHIYRTAIE GSDLTVYNFF SLSNAKVLTA GTYDEKYRLM GVFGELSLNY KDYLYLTLTG
RNDKSSSLAS PNNTFFYPSA SLSYIFSDHI KLPAAISNAK FKFSYARIGK DAAPYATSLG
YANYTGLPTG YTGFTRPAQL GDPTLKPEFT DTYEGGLSMR LFSNRIGFDV NYYHSLSTDQ
IISVPVSTTT GYATAAINAG SMRNKGIEVS VSGTPVKTTD FSWETTLNFS ANRNKVVSLR
SDLKEIVAAD EHGYLNARVT MKLIPGEAYG TLYGTEYKRY FSPEEIAAGL DKSSEASDPS
RPLLIGADGF PIIGVSSDQK KLGNVQPRWI GGWNNTFHYK NLSLNVLFDA RVGQDRYNQL
GNYFSAFGIA KYTENRTEHK LFEGLLANGT PNTKEVWLGQ GIDPATGINY GNGYYRNVHR
GVSETFIEDA SWVRLRSMSL AYTLPKTWIK NSFVKNVNVS VTGNNLFLWT GYDGFDPEST
TTNSGSNVEG FAGMTYPAVR SFLFSLNVGF
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