Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2341 |
Symbol | |
ID | 8253447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2729945 |
End bp | 2731438 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935990 |
Product | malate:quinone oxidoreductase |
Protein accession | YP_003092607 |
Protein GI | 255532235 |
COG category | [R] General function prediction only |
COG ID | [COG0579] Predicted dehydrogenase |
TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.286796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAA AAAACAGTAA TTCTGATAAA AATGTTGATG TTGTATTAAT TGGAGCAGGT ATTATGAGTG CTACTTTGGG TATGTTGCTC AAAGAACTGC AGCCAGATAT TACCATCGAT ATTTTTGAAA GATTAGATGT TGCAGCGGCT GAAAGTTCTG ATGCATGGAA CAATGCAGGA ACTGGCCACT CTGCTTTTTG TGAATTAAAT TATACGCCTC AATTAACCGA TGGTTCTGTT GACACTAAAA AAGCCATCTC AATTGCTGAG TCTTTTGAAG TATCGAAACA GTTTTGGTCT TTTCTTGTAA AAAGTAAACT GGTTGATGCA CCCGAAACCT TTATTAAGGC AATTCCGCAC ATGAGCTTTG TTTGGGGGGA TGAAAATGTG GATTTCCTGA AAAAAAGATA TGCAAAATTA CAGGAAAGTG ATTTGTTTAA AGGAATGGTT TATTCGGAAG ATGCTGCACA GCTTGCTGAC TGGATGCCCT TAGTGATGAA GGACCGTAAG CCAACAGATA AGGTTGCCGC TACCAGGATG GAAATTGGTA CCGATGTAAA TTTTGGCGCC TTAACCCGTA TGATGTTTAA TAAATTGCAG ACCAAACCCG ATGTAAAGCT TTATTTTCAC CATGATGTAA AGAAACTTAA GCAAAAGAAT GGTTTATGGG AAGTAAAGGT TAAGGATGAG AATACCGGGC AAAAAAGAGT GGTTAAAGCC AAATTTGTGT TTATAGGTGC CGGTGGAGGC TCATTGCCAC TGCTCGAAAA AGCGGATATA CCTGAAGGAA AAGGATTTGG TGGTTTTCCG GTAAGCGGAC AATGGTTAAA ATGTATAAAT CCTGAAATTA TAGAAAAGCA CAATGCTAAG GTTTATGGAA AAGCATCTGT AGGTGCACCC CCAATGTCTG TACCACATTT GGATACCAGG ATGATTGATG GTAAGAAAGC CTTATTGTTT GGCCCTTACG CTGGTTTTTC AACCCGCTTT CTAAAACATG GTTCTTTACT AGATTTACCG CTATCTATAA AAATCAATAA CATCCGGCCA ATGATATCGG CCGGTCTCGA TAATTTGCCC CTTACCAAAT ACCTGATAGA CCAGGTTCGT CAATCTCCTG AAGACAGGAT GCTTGCCCTT CGTGAATATT TACCTACTGC AAAAATGGAA GATTGGGAAT TGGAAACTGC CGGTCAGCGT GTACAGGTGA TTAAAAAGGA CGAAGAACAT GGAGGGATTC TGGAGTTTGG TACGGAAGTA GTTACTGCAG CTGACGGCTC AATAGCAGCG CTTTTGGGCG CATCACCAGG TGCTTCTACT GCTGTTTCTA TTATGATCAC CTTAATGGAA CGTTGTTTTA CCGACCAAAT CAATACACCG GAATGGCAGC AAAAGCTGAA ACAAATGATA CCTTCTTATG GAGAGGCACT GAACGGTAAT CCGCAGTTAA CAGAAAATAT CAGAACACAG ACCAGTCATG CGTTAGGCTT GTAA
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Protein sequence | MTRKNSNSDK NVDVVLIGAG IMSATLGMLL KELQPDITID IFERLDVAAA ESSDAWNNAG TGHSAFCELN YTPQLTDGSV DTKKAISIAE SFEVSKQFWS FLVKSKLVDA PETFIKAIPH MSFVWGDENV DFLKKRYAKL QESDLFKGMV YSEDAAQLAD WMPLVMKDRK PTDKVAATRM EIGTDVNFGA LTRMMFNKLQ TKPDVKLYFH HDVKKLKQKN GLWEVKVKDE NTGQKRVVKA KFVFIGAGGG SLPLLEKADI PEGKGFGGFP VSGQWLKCIN PEIIEKHNAK VYGKASVGAP PMSVPHLDTR MIDGKKALLF GPYAGFSTRF LKHGSLLDLP LSIKINNIRP MISAGLDNLP LTKYLIDQVR QSPEDRMLAL REYLPTAKME DWELETAGQR VQVIKKDEEH GGILEFGTEV VTAADGSIAA LLGASPGAST AVSIMITLME RCFTDQINTP EWQQKLKQMI PSYGEALNGN PQLTENIRTQ TSHALGL
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