| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2336 |
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| Symbol | |
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| ID | 8253442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2723204 |
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| End bp | 2724256 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935985 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003092602 |
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| Protein GI | 255532230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.870969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.135011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAGG TAATAGATGA CTATGCGATT CTGTTTTTGG ACAGGTATGG GAGTATAGGG
AATTGGAATA AAGAAGCTGA GCGAATAAAA GGATATCATG CAGCTGAGGT TATTGGTCAT
AGTTTCAGTA TGTTCTATAG TGAGGAAAGT CGTAGAAACA AATTGCCGGA ATTACTTATT
GAAGAAGCTA AACTGAAAGG CAGGGCACAG CATGAAGGCT GGCATGTAAG AAAAGGAGAG
GAGCTTTTCT GGGGCTTTGT AACCATTTCT ACCATATTGG ACGACAATGA TGTTATAGTT
GGTTACTCTT TGTTTGTAAG GGACCTGTCG GCTAAGCGAC ATCTGGAAAA AACCACAGAG
GAATATGCCC GTGAACTTGA AATCAAGAAT AAGGAGCTTG AACAGTTTGT ATATATCGCT
TCCCATGATT TACAGGAGCC GCTCTTAACA GTTAAAAATT TTGTTGAGTT ATTTAAGGAC
GAGTATAAAG ATGTATTTGA TGATAATGCA AAGCTTTATC TCCAGTTTAT AGACAGGTCT
ACCGAGCGGA TGCGGAACCT GATCAAGGGC TTGCTGGATT ATTCGAGACT AGGTGGACAA
CAGAGTAAAA CATTGGTAGA TTGTAATACC TTAATGGACG GATTACAAAG CGACCTTTTT
AGCAGCATAT TTGCTACAGG TGCAAAAATT TATTATCAGG ATCTGCCAAT TGTTTATGGT
TACGAAACAG GACTCCGTCA GCTTTTTCAA AATCTGTTGA GTAATGCTTT AAAATTTAAA
AAACAAGATG TTGATCCGGA AATTTACATT GCTGTTGTTG GGCATGATAA GTTCTGGCAT
TTTGAATTTA GGGACAATGG GATAGGAATA GAAGAAAAGT ATAAGGAAAA AGTATTTGTA
ATGTTTCAGC GCCTTCACAA TGTAGCAGAT TATGAGGGTT ATGGCATTGG ACTTTCACAT
TGCAAAAAGA TTGTAGAACT ACATGGAGGT CAAATCTCGG TTAAATCGGT TTTAGGAGAG
GGGAGCACCT TTTGTTTTTC TATCAGGGTA TAA
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| Protein sequence | MLEVIDDYAI LFLDRYGSIG NWNKEAERIK GYHAAEVIGH SFSMFYSEES RRNKLPELLI
EEAKLKGRAQ HEGWHVRKGE ELFWGFVTIS TILDDNDVIV GYSLFVRDLS AKRHLEKTTE
EYARELEIKN KELEQFVYIA SHDLQEPLLT VKNFVELFKD EYKDVFDDNA KLYLQFIDRS
TERMRNLIKG LLDYSRLGGQ QSKTLVDCNT LMDGLQSDLF SSIFATGAKI YYQDLPIVYG
YETGLRQLFQ NLLSNALKFK KQDVDPEIYI AVVGHDKFWH FEFRDNGIGI EEKYKEKVFV
MFQRLHNVAD YEGYGIGLSH CKKIVELHGG QISVKSVLGE GSTFCFSIRV
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