| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2315 |
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| Symbol | |
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| ID | 8253421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2693885 |
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| End bp | 2695597 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935964 |
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| Product | Dihydroxy-acid dehydratase |
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| Protein accession | YP_003092581 |
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| Protein GI | 255532209 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.123092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.14422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAT TAAAACTTAG AAGTCGAGAC TGGTTTGGCC GTAAGGGCAA AGACGGGTTA
ATTTATCGTG CATGGATGAA AAATCAGGGT GTACCGGCAC ATCAATTTGA AGGTAAACCT
GTCATTGGAA TCTGTAATAC TTGGTCTGAA CTAACACCAT GTAACGGACA TCTGCGTGAA
CTGGCAGCAT CTGTAAAACA TGGAATTTAC GAAGCAGGAG GTTTCCCTGT AGAGTTTCCG
GTATTGTCAT TGGGCGAAAC ATTGATGAAA CCTACAGCCA TGTTATACCG GAATTTGGCA
AGTATGGATG TAGAGGAATC TATCCGTGCC AATCCCTTAG ATGGTGTGGT ACTACTTTGT
GGTTGCGATA AAACGACTCC TTCCTTAGTA ATGGGCGCTT GCAGTGTAGA TCTTCCTTCT
ATTGTGGTTT CGGGAGGCCC CATGCTTACC GGGAAATACA AAGGGGCTGA TATTGGAACC
TCTGATGTTT GGAGGTTTAG TGAGGCCAGC CGATCTGGAA CGATGAACAT GGAAGACTTA
GAAATGGCTG AAGCTGGCAT GTGCCGGAGC AACGGAAGCT GCGCCGTAAT GGGCACAGCC
TCAACAATGG CCTGCATGGT AGAATCTTTG GGTTTGTCTT TACCACATAA TGCAGCGATC
CCTGCAGCCG ATTCGCGTCG TAAAGTTTTA GCGCATTTAT CTGGTATGAG AATCGTTGAA
ATGGTGAAGG AAGATTTGAA ATTATCAAAT ATCCTAACGA AAAAAGCATT TGAAAATGCA
ATTATGGTTA ATGCTGCTAT AAGCGGATCT ACCAATTTTG TAATTCATTT GCTGGCAATT
GCCGGGCGTA TTGGTGTTGA TCTTAGCTTG GAAGATTTTG ATTTGCTTGC TAAAATTCCT
TTGATGGTTA ATTTGCAACC ATCGGGACGC TATTTTATGG AAGACTTATA CTATGCAGGC
GGATTGCCTG CGGTATTACA AGAATTAAGA AAGGAACTTC ACACAGATTG TATAACCGTA
AACGGCCGAA CTATTGGAGA AAATGCAGCG AAAGGGGTTT GCTACAACAG AGAGGTGATC
TCTACCTTGT CTGATCCGTT TAATCCCATC TCGGGCGTTA TTGTATTAAA AGGTAATGTT
TGTGAAGATG GTGCTGTGAT GAAACCTGCC TGTGCAAGTG CCAGTTTGAT GCAACATGTG
GGTAAGGCTG TGGTATTCGA AAATATTGAA GATTATAAGG CCCGTATTGA TGACCCAGAT
TTGGAAGTAG ACAAAGACAG TGTTCTAGTA TTAAAAAATG TAGGGCCAAA AGGCTATCCT
GGTATGCCAG AAGTAGGAAA TATGGGCATC CCTAAAAAGC TACTGGCTGA AGGCGTAACG
GATATGGTAC GTATTTCTGA TGGGAGAATG AGCGGAACAG CTTTTGGTAC TGTTGTGCTC
CATGTCTCAC CAGAATCGGC TGCAGGAGGT ACATTAGGGA TCATTCAAAA TGGCGATGTC
ATTGTACTTG ATGTGGCAAA CAGGAGCTTA AATGTGCAGT TAAGTGAGGA AGAAATAAAC
CAGCGGAAAG AAAATAAAGC GACTGCGATT GAGCATACCG ACAGGGGATA TGTACGTTTA
TATGTAGATC ATGTACAGCA AGCACACTTA GGAGCAGACC TGGATATTTT GCGGGGTAAA
TCTGGCAGTG CAATATTAAG GGATTCTCAT TAA
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| Protein sequence | MTELKLRSRD WFGRKGKDGL IYRAWMKNQG VPAHQFEGKP VIGICNTWSE LTPCNGHLRE
LAASVKHGIY EAGGFPVEFP VLSLGETLMK PTAMLYRNLA SMDVEESIRA NPLDGVVLLC
GCDKTTPSLV MGACSVDLPS IVVSGGPMLT GKYKGADIGT SDVWRFSEAS RSGTMNMEDL
EMAEAGMCRS NGSCAVMGTA STMACMVESL GLSLPHNAAI PAADSRRKVL AHLSGMRIVE
MVKEDLKLSN ILTKKAFENA IMVNAAISGS TNFVIHLLAI AGRIGVDLSL EDFDLLAKIP
LMVNLQPSGR YFMEDLYYAG GLPAVLQELR KELHTDCITV NGRTIGENAA KGVCYNREVI
STLSDPFNPI SGVIVLKGNV CEDGAVMKPA CASASLMQHV GKAVVFENIE DYKARIDDPD
LEVDKDSVLV LKNVGPKGYP GMPEVGNMGI PKKLLAEGVT DMVRISDGRM SGTAFGTVVL
HVSPESAAGG TLGIIQNGDV IVLDVANRSL NVQLSEEEIN QRKENKATAI EHTDRGYVRL
YVDHVQQAHL GADLDILRGK SGSAILRDSH
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