| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2294 |
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| Symbol | |
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| ID | 8253400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2664073 |
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| End bp | 2665374 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935943 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003092560 |
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| Protein GI | 255532188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.747868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00963008 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAGAC TAGCTTTTTT AATGTCTATA ATGATCATAT TCAATGCATG TAAGGTTAGG
CATGCTAATT TCTCTGAAGA AAGCCCAAGC CCTGAATCTG TTTATACCAT TATGAAAAAA
GTAGCCGATT GGCAATTGAA CAGTATCAGC AGGAAGGGAT GGAGGCATCC GGAAAGGGAC
TGGACCAATG GAGCTTTGTA TGCAGGCCTC TTAAAATTCG CTGAAGTGGC AAATGATCCC
ATTTACTATG GTTTTATGCA GGAAAAAGTT GGTAAAAAAT TCGATTGGAA ATTGTATAAT
ACCGATATGC GCTACCATGC AGATTTTTAT TGTGTTGGCT TAATGTACAG CCGAATGTAC
GCCTTATACA AGGATCCAAA GATGGTTGCA GATTTCAAAT TGCTGGGTGA TACCTTAATT
GCAAGGCCAC ATACCGAATC TTTGGAAAAC AAAAACAGGG TTGATAAAAG GGAATGGAGT
TGGTGTGATG CCCTGTTTAT GGCGCCACCA GCCTTAGCTG CATTATCAAA AGCAACTGAA
GAGATTAAAT ACCTGGATAT ATGTACTCAG CTTTGGTGGA AAACTTCAGA CTATCTATAT
GACAAGGAAG AAAGTTTGTT CTATCGTGAT AGCCGCTATT TCAAGCAAAA AGAAAAAAAT
GGTAGGAGGG TTTTTTGGTC GAGGGGAAAC GGATGGGTAA TGGGCGGTTT GGTAGGCGTA
CTGCAAAGCA TGCCTGCAGA TTATCCTAGC AGACCACGTT TTAACCAGCA GTTTAAAGAG
ATGGCTAAGA AAGTAGCCTC GCTGCAACAG CCAGACGGTA CATGGCATGC AAGTTTATTG
GATCCTGCAA GTTTCCCTGT CAAAGAAACC AGCGGCACCG GGTTTTACTG TTACGCCTTG
GCATGGGGAA TTAACAACGG TTTGCTCGAT GCGCAAACCT ATGCGCCGGG CGTTTTAAAA
GCTTGGAAAG CATTGACCGA CTGTGTGCAT CCCGATGGTA AATTAGGCTT TGTTCAAAAA
ATTGGCGATA GCCCAGCGAG TGTAGGCTAT GAAGATACCG AAGTATACGG TGTTTGTGCC
TTTTTGTTGG CAGGTACGGA AATCATGAAA TTGAGCATGC AGCAGAAAAA CTTCAAAGCA
GATCTGGTAT TAACTAATCC AAAAGCAGGT ACGACTACAG TTGGTGCATT ATTAAATGCT
CCAGAAAATA AAAATGATAG CTATCGCAAT TTGCTTACCG GGTTGATAGT TAACAAAGAG
ACGACTGTAA ATACTGGCAC CACGATTTAC CTCAAAAATT AG
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| Protein sequence | MIRLAFLMSI MIIFNACKVR HANFSEESPS PESVYTIMKK VADWQLNSIS RKGWRHPERD
WTNGALYAGL LKFAEVANDP IYYGFMQEKV GKKFDWKLYN TDMRYHADFY CVGLMYSRMY
ALYKDPKMVA DFKLLGDTLI ARPHTESLEN KNRVDKREWS WCDALFMAPP ALAALSKATE
EIKYLDICTQ LWWKTSDYLY DKEESLFYRD SRYFKQKEKN GRRVFWSRGN GWVMGGLVGV
LQSMPADYPS RPRFNQQFKE MAKKVASLQQ PDGTWHASLL DPASFPVKET SGTGFYCYAL
AWGINNGLLD AQTYAPGVLK AWKALTDCVH PDGKLGFVQK IGDSPASVGY EDTEVYGVCA
FLLAGTEIMK LSMQQKNFKA DLVLTNPKAG TTTVGALLNA PENKNDSYRN LLTGLIVNKE
TTVNTGTTIY LKN
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