| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2251 |
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| Symbol | |
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| ID | 8253357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2616493 |
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| End bp | 2617074 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935900 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003092517 |
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| Protein GI | 255532145 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAA TTGATGACGA TCTGTTACTG TCCATTAGTA AGGGTGATGA AGAAGCGTTT
AAATGCTTAT TTAGGAAACA CCGTGATAAA TTATTTGCCT ATATTTTCAA GATCACAAAA
TCAAGGGAAA CGGCAGAAGA AATTGTAATG GATGTATTTA TGAAAATATG GGAAAGCGGA
GAGGTCCTGA CAGAAATAAG GAACTTCCCG GCATTCCTTT TTCACATCGC CAGAAATAAG
TCGCTCGACT TTCTACGCAT GGCCGCAAAA GACCGCGTAT TGGTCGAATT GCTCTGGGAC
CAGATCAATA CACCAGCTGC CGACCAGCCA GACGATCAAT TATTGCTAAA CGAATTAAAA
TCCAACATCG ATAAAGCGGT AGCACAGCTA TCGCCACAGC GTAAATCTGT ATTCCGCCTT
AGCCGCGAGC AGCACATGAC CTACGATCAG ATCGCCAGTC ACCTGCAACT TTCAAAAAGT
ACTGTAAAAA ACCACATGCT CGATTCCCTC CATTTTATTC GTCATCACTT AAACACGAAT
TTTGAGCTCA TTTTGCTCAT ATTATTTTTT TTAAAAAAAT AA
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| Protein sequence | MKLIDDDLLL SISKGDEEAF KCLFRKHRDK LFAYIFKITK SRETAEEIVM DVFMKIWESG
EVLTEIRNFP AFLFHIARNK SLDFLRMAAK DRVLVELLWD QINTPAADQP DDQLLLNELK
SNIDKAVAQL SPQRKSVFRL SREQHMTYDQ IASHLQLSKS TVKNHMLDSL HFIRHHLNTN
FELILLILFF LKK
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