Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2229 |
Symbol | |
ID | 8253335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2577852 |
End bp | 2580029 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935878 |
Product | trehalose-phosphatase |
Protein accession | YP_003092495 |
Protein GI | 255532123 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.967304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACAA ATAGTAAAAC AATAATTGTA TCCAATCGCT TACCGGTTAA AATTACAGAA GAAAACGGGG AATATATACT TAGCCCGAGT GAAGGCGGCC TGGCCACTGG TTTAGGTTCT GTGTATAAAA GAAATAACAA CATCTGGATT GGCTGGCCGG GCATAGAAAT CCCTGAGCAC CGGCAGGCTG AAGTCACCGA GAAACTAGCC GGTTTAAATC TTATACCTGT TTTCTTAAGT AATGAAGAGA TCAGTCTATA TTACGAAGGC TTTTCAAATG AAGTACTCTG GCCGGTATTC CATTATCTGG TTACTTACGC AAATTTTGAA CAGGCTTATT GGGATTCCTA CAAAACTGTA AATGAGAAAT TTAAGGCGGT TACTTTAAAT CACCTTAACA GCGACGATAT CATATGGATT CACGATTACC AGCTGCTCCT GCTGCCTTGT CTCATAAGGT CGGAGCAGCA GGAAGTTACC ATAGGCTTTT TTCAGCACAT TCCTTTTCCT TCGTTTGAAA TTTTCCGGCT CATCCCCTGG AGGGAACAAT TGATTGCGGG AATGCTGGGC GCTGATCTGC TGGGCTTTCA TACTTTTGAT GATGCCAGAC ACTTTTTAAG TGCGGCATCC AGACTTTCTT CCAGTAACCT GTCGGACAAT ATACTTATCT ATAAGAACCG ACAGGTAGTA GTAGAGGCTT TTCCAATGGG TATAGATGCA GAAAAATTTG ATAAGCTGAC CAGAACGGAA AAAGTAGCCC GGTATACCAG CTCATTTAAA GCCAGTCTGA AAAATGTAAA GACCATACTT ACTATTGACA GACTGGATTA CAGTAAGGGT ATATTGCAAC GTTTACAGGC TTTTGAACTG CTGTTACAAC TACATCCTGA ATATATCGGT AAACTTGCAC TTTACATGAT TGTTGTGCCT TCAAGGGATA CAGTACCCAG GTATAAAGAA TTAAAAGATC AGATAGATCA GCTTGTAGGA AATATAAATG CCCGTTTCCG GACCATCAAC TGGGTACCCG TACATTATTT TTACAGGTCA TTCTCTGTCG AATTTCTTTC GGCCATTTAC AGTACGGCTG ATATCTGCCT CGTAACACCC ATGCGCGACG GGATGAACCT GGTTAGTAAA GAATATGTGG CTTCAAGAAG CAACGGGGAT GGCGTACTGA TATTAAGTGA AATGGCCGGT GCCTCAAAAG AACTAAATGA GGCCCTAATT GTAAACCCAA ATGACATTGG CAACATTATG GAGGCTATTG TGCAGGCCAT AAACATGTCG CCTGAAGAGC AGCATAAAAG AATAAAAAGT ATGCGTGCCA TTGTAAACAA GTTTAACATC CATCTTTGGG TCAAAAACTT TATGGATAAA CTTAATGAAG TAAAATCGAT GCAGGAATCT TTACATACCA AACATGCAGT AGCAGCAGTA AGGGCACAAA TTGCGGCAGA CTATAAAAAG GCAAAAGACC GGTATATTTT TCTGGATTAT GATGGTACCC TGGTGGGTTT TAAAGGTGAT ATTGATCAGG CCTCACCTGA TGAGGAATTG TATTCAATTT TAAACAAGCT GATCCTTGAC CCTGCAAACC GCGTAATACT GATCAGTGGA CGCCGTTATC AGACCTTACA GCAATGGTTC GGACATTTAA ATCTGGATAT GATTGCCGAA CACGGCGCAT GGCAGAAATA CAGGGATGCA GAATGGAAGG CCCTGCCCCT GCTTACCGAT AAATGGAAAC AGGAGATCAG AACTGTACTG GATATCTATA CCGACCGCAC CCCTGGTTCT TTTATCGAAG AAAAAAGTTA TTCGCTGGTT TGGCATTACC GTAAGGCCGA GGAAGGTTTG GGCGAATTAA GGGCCAATGA GATCATCAAT CATTTGCGGA TGGTTATTGC CGATAAAGGA CTGCAGATGA TGCCCGGAAA CAAGGTTATA GAATTTAAAA ATATTGAAGT AAACAAAGGT AAAGCAGCAC AAAACTGGCT TTATGATAAC GATCCCGATT TTATACTGGC ACTTGGTGAT GACCATACGG ACGAAGATAT CTTTAAAGCT TTAGCGCCCG AAGCATATAC CATTAAAGTG GGCAGTAACA TTTCAGCGGC CCGGTATTAC CTCAAAGATT ATAAAGAAGT AAGAGAACTG CTTAAAGACC TGTGTTAA
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Protein sequence | MITNSKTIIV SNRLPVKITE ENGEYILSPS EGGLATGLGS VYKRNNNIWI GWPGIEIPEH RQAEVTEKLA GLNLIPVFLS NEEISLYYEG FSNEVLWPVF HYLVTYANFE QAYWDSYKTV NEKFKAVTLN HLNSDDIIWI HDYQLLLLPC LIRSEQQEVT IGFFQHIPFP SFEIFRLIPW REQLIAGMLG ADLLGFHTFD DARHFLSAAS RLSSSNLSDN ILIYKNRQVV VEAFPMGIDA EKFDKLTRTE KVARYTSSFK ASLKNVKTIL TIDRLDYSKG ILQRLQAFEL LLQLHPEYIG KLALYMIVVP SRDTVPRYKE LKDQIDQLVG NINARFRTIN WVPVHYFYRS FSVEFLSAIY STADICLVTP MRDGMNLVSK EYVASRSNGD GVLILSEMAG ASKELNEALI VNPNDIGNIM EAIVQAINMS PEEQHKRIKS MRAIVNKFNI HLWVKNFMDK LNEVKSMQES LHTKHAVAAV RAQIAADYKK AKDRYIFLDY DGTLVGFKGD IDQASPDEEL YSILNKLILD PANRVILISG RRYQTLQQWF GHLNLDMIAE HGAWQKYRDA EWKALPLLTD KWKQEIRTVL DIYTDRTPGS FIEEKSYSLV WHYRKAEEGL GELRANEIIN HLRMVIADKG LQMMPGNKVI EFKNIEVNKG KAAQNWLYDN DPDFILALGD DHTDEDIFKA LAPEAYTIKV GSNISAARYY LKDYKEVREL LKDLC
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