| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2225 |
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| Symbol | |
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| ID | 8253331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2570631 |
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| End bp | 2572106 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935874 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003092491 |
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| Protein GI | 255532119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAGCAATAAC CATCATATCA GCTATTTTTT TATCTGCTTT AAGTCCGGCT
TGTAAAAAAA TACTGGAAGT AACCCCTCAA TCCAGCATTA CTGATGCCGT TTTCTTTAAA
AATGAAAACG ATTTTGAGCC TTATGTTACC GGTATATATA CCTCGATGCG TACATTTTCC
AACGATATTG TATATGGTAC AGAAAGGAGT GAAGAGCTTG TAGCCGCCTT AAATTCCAGG
TTCGGGGTAG CCTGGACACA GATCATTACA CCCACCTCTG GGGCAATTAA TTACAACAAC
TGGTACAAGG CCATTGGAAA CTGCAATTTA TTGCTGGCCA AAATTGAGGC CTTTCCTTTT
GCAGCTAATC CTGACCTTAA AAAAAGGATA CTGGCAGAAA CCTATTGCCT TCGGGCCTAT
TTCTACTTCC ATTTAACCAG AATCATTGGC GATGCCCCCA TTATGCTGGA TGCGGTAGTA
GACGAAAATG TCCCCTTGCT ATCCAGGGCA AAAGCCAGCG ATGTAATGAA GCAGATCCAG
TCAGACCTTG ACCTGGCCAT CCAGAATTTT ACCAGTATCG GAGGTTTTTC TAAAGGTGTT
TATCCATCAA AGTACCGCTT TGCTTACGGA TCGGCTATGG CCCTGAAAGC TGATGCCTAT
CTTTGGAGCG CAAAAGTACT GGGTGGTACC GATCCGGATT TTAACAGTGC CATAGCAGCC
ATAACTGAAG TAGAAGCTTC CGGTTTAATC CTGAACCAGG ACTATAAAAA CGTAACTGGC
ATCAGAGCAG CAGGCAACAC AGAAGTGGCC CTGGCCGCTT ATTTTCAGAG GGATGAGATT
TCCAATAATT ACGGACTTAA CGCATTGCCT TATTTAGCTG GTGTACAGGG CGCATTAAAC
CTAAGCCAGA TACCTTATGC ACAAACTACC GTAAACGGAC AAGGCGCTTA CCAGATCAGC
CCCAAATCCA GGGCCTTATT TACCAATGTG GCCGACAAAC GGATTCCTTA TACCTGGATC
ACTGAAATTC AGGCCTCTGG ACCAAAGATC TCCTGGATCA CAAAATATCC TGGTAACGTG
TATCCGGACA GCCGTGTTTC AGATAATGAC ATCATCATTT ACAGGTTATC TGATATTTTT
CTGATGAAAG CAGAAGCTTA TGCAGCGTTG AACAATATTC CGAAAGCATT GGAATACCTG
AATAAGGTAA GGTTCAGGGC GGGTACTGGC GACTATACCG CTTCTGTTTT GAAGACTGAT
GTAGAAAAGG AAATTCTTGA TGAACGCGGC AGGGAGCTGT TTTTTGAAAA TAAACGCTGG
TATGATTTGG TCCGGTTCCA TAAAGGCGGT ACCATCAATG TATATACCTA TGTGCCCAAT
CTGGCTGGAA AAACCACACC ACTGTTCTGG CCATTAAATA CCACAGTATT CGCAAATAAC
CCAAACATCA AACAAACAGA AGGCTACATT CAATAA
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| Protein sequence | MKKTAITIIS AIFLSALSPA CKKILEVTPQ SSITDAVFFK NENDFEPYVT GIYTSMRTFS
NDIVYGTERS EELVAALNSR FGVAWTQIIT PTSGAINYNN WYKAIGNCNL LLAKIEAFPF
AANPDLKKRI LAETYCLRAY FYFHLTRIIG DAPIMLDAVV DENVPLLSRA KASDVMKQIQ
SDLDLAIQNF TSIGGFSKGV YPSKYRFAYG SAMALKADAY LWSAKVLGGT DPDFNSAIAA
ITEVEASGLI LNQDYKNVTG IRAAGNTEVA LAAYFQRDEI SNNYGLNALP YLAGVQGALN
LSQIPYAQTT VNGQGAYQIS PKSRALFTNV ADKRIPYTWI TEIQASGPKI SWITKYPGNV
YPDSRVSDND IIIYRLSDIF LMKAEAYAAL NNIPKALEYL NKVRFRAGTG DYTASVLKTD
VEKEILDERG RELFFENKRW YDLVRFHKGG TINVYTYVPN LAGKTTPLFW PLNTTVFANN
PNIKQTEGYI Q
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