Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2195 |
Symbol | |
ID | 8253301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2525805 |
End bp | 2527010 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935844 |
Product | Glycine C-acetyltransferase |
Protein accession | YP_003092461 |
Protein GI | 255532089 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.880865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAAA AATTATACGA TAGGATAGCA GCTTTTAAAG ACGCTAACGC AATTAAGGAA AAGGGTCTAT ATCCTTATTT CCGTGCAATA GAATCAGGCC AGGATACAGA AGTGGTGATA GATGGGAAGA AGGTGCTGAT GTTTGGCTCT AATTCCTATC TCGGTTTAAC TAATCACCCT AAGATTAAAG AAGCCTCTAA AGCTGCAATA GACAAGTATG GTACCGGATG TGCGGGTTCG AGGTTTTTAA ACGGGACACT GGATATCCAT ATTGAACTGG AAAAAAGGCT TGCTGCTTAT GTGGGCAAGG AAGCCGCTGT ATTGTTCAGT ACAGGTTTTC AGGTAAACCT GGGTGTGATC TCCTGTTTAC TGGATAGAAA TGATTACCTG ATTTTGGATG AATATGACCA TGCCTCGATC ATTGACGGCA GTCGTTTATC CTTTTCGAGG TCTATCAAAT ATGCCCACAA CGATATGGAC GACCTGCGCA AGAAACTGAG CCGTTTACCT GAAGACGCAG CCAAGCTGAT TGTTGCGGAT GGTATTTTCA GCATGGAGGG CGACCTGGTA AACCTGCCGG AAATTGTAAA AATAGCCAAT GAATATGGCG CCAATATTAT GATGGATGAT GCCCATAGCC TGGGTGTGAT TGGCTTTAAC GGTGCGGGTA CGGCTTCACA TTTTGGCTTA ACGGATGAGG TTGACCTGAT TATGGGTACT TTTAGCAAGT CACTGGCTTC GCTGGGTGGT TTTATTGCCG GTACAGAAGA AACCATAGAA TTTGTAAAAC ACCGGGCACG CTCTTTAATG TTTAGTGCCA GTATGCCTCC GGGTGCTGTA GCCAGTGTAA TTGCTGCTTT GGACATCATT GAATCGGAGC CGGAGCGTAT AGACAAGCTT TGGGCAAATA CCAATTATGC CAAAAAACTA TTGGTTGAGG CAGGCTTTGA CATTGGTCAT ACCGACAGCC CGATCATTCC GGTTTACATC AGGGACAATG ACAAAACCTT TATGGTAACA AATATCCTGA GTAACAACGG GATTTTTGTA AACCCTGTGG TATCCCCTGC TGTCCCTTCC GATTCTTCGC TGATCAGGTT CTCGCTGATG GCTACACATA CTTTTGAACA GATTGAAGAA GCCGTAGAAA AATTGTCGGC CGCTGCAAAA GAAGTGCAGG TAAAATCATT CCAGGAAACT ATATAA
|
Protein sequence | MRKKLYDRIA AFKDANAIKE KGLYPYFRAI ESGQDTEVVI DGKKVLMFGS NSYLGLTNHP KIKEASKAAI DKYGTGCAGS RFLNGTLDIH IELEKRLAAY VGKEAAVLFS TGFQVNLGVI SCLLDRNDYL ILDEYDHASI IDGSRLSFSR SIKYAHNDMD DLRKKLSRLP EDAAKLIVAD GIFSMEGDLV NLPEIVKIAN EYGANIMMDD AHSLGVIGFN GAGTASHFGL TDEVDLIMGT FSKSLASLGG FIAGTEETIE FVKHRARSLM FSASMPPGAV ASVIAALDII ESEPERIDKL WANTNYAKKL LVEAGFDIGH TDSPIIPVYI RDNDKTFMVT NILSNNGIFV NPVVSPAVPS DSSLIRFSLM ATHTFEQIEE AVEKLSAAAK EVQVKSFQET I
|
| |