Gene Phep_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2195 
Symbol 
ID8253301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2525805 
End bp2527010 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content44% 
IMG OID644935844 
ProductGlycine C-acetyltransferase 
Protein accessionYP_003092461 
Protein GI255532089 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.880865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAA AATTATACGA TAGGATAGCA GCTTTTAAAG ACGCTAACGC AATTAAGGAA 
AAGGGTCTAT ATCCTTATTT CCGTGCAATA GAATCAGGCC AGGATACAGA AGTGGTGATA
GATGGGAAGA AGGTGCTGAT GTTTGGCTCT AATTCCTATC TCGGTTTAAC TAATCACCCT
AAGATTAAAG AAGCCTCTAA AGCTGCAATA GACAAGTATG GTACCGGATG TGCGGGTTCG
AGGTTTTTAA ACGGGACACT GGATATCCAT ATTGAACTGG AAAAAAGGCT TGCTGCTTAT
GTGGGCAAGG AAGCCGCTGT ATTGTTCAGT ACAGGTTTTC AGGTAAACCT GGGTGTGATC
TCCTGTTTAC TGGATAGAAA TGATTACCTG ATTTTGGATG AATATGACCA TGCCTCGATC
ATTGACGGCA GTCGTTTATC CTTTTCGAGG TCTATCAAAT ATGCCCACAA CGATATGGAC
GACCTGCGCA AGAAACTGAG CCGTTTACCT GAAGACGCAG CCAAGCTGAT TGTTGCGGAT
GGTATTTTCA GCATGGAGGG CGACCTGGTA AACCTGCCGG AAATTGTAAA AATAGCCAAT
GAATATGGCG CCAATATTAT GATGGATGAT GCCCATAGCC TGGGTGTGAT TGGCTTTAAC
GGTGCGGGTA CGGCTTCACA TTTTGGCTTA ACGGATGAGG TTGACCTGAT TATGGGTACT
TTTAGCAAGT CACTGGCTTC GCTGGGTGGT TTTATTGCCG GTACAGAAGA AACCATAGAA
TTTGTAAAAC ACCGGGCACG CTCTTTAATG TTTAGTGCCA GTATGCCTCC GGGTGCTGTA
GCCAGTGTAA TTGCTGCTTT GGACATCATT GAATCGGAGC CGGAGCGTAT AGACAAGCTT
TGGGCAAATA CCAATTATGC CAAAAAACTA TTGGTTGAGG CAGGCTTTGA CATTGGTCAT
ACCGACAGCC CGATCATTCC GGTTTACATC AGGGACAATG ACAAAACCTT TATGGTAACA
AATATCCTGA GTAACAACGG GATTTTTGTA AACCCTGTGG TATCCCCTGC TGTCCCTTCC
GATTCTTCGC TGATCAGGTT CTCGCTGATG GCTACACATA CTTTTGAACA GATTGAAGAA
GCCGTAGAAA AATTGTCGGC CGCTGCAAAA GAAGTGCAGG TAAAATCATT CCAGGAAACT
ATATAA
 
Protein sequence
MRKKLYDRIA AFKDANAIKE KGLYPYFRAI ESGQDTEVVI DGKKVLMFGS NSYLGLTNHP 
KIKEASKAAI DKYGTGCAGS RFLNGTLDIH IELEKRLAAY VGKEAAVLFS TGFQVNLGVI
SCLLDRNDYL ILDEYDHASI IDGSRLSFSR SIKYAHNDMD DLRKKLSRLP EDAAKLIVAD
GIFSMEGDLV NLPEIVKIAN EYGANIMMDD AHSLGVIGFN GAGTASHFGL TDEVDLIMGT
FSKSLASLGG FIAGTEETIE FVKHRARSLM FSASMPPGAV ASVIAALDII ESEPERIDKL
WANTNYAKKL LVEAGFDIGH TDSPIIPVYI RDNDKTFMVT NILSNNGIFV NPVVSPAVPS
DSSLIRFSLM ATHTFEQIEE AVEKLSAAAK EVQVKSFQET I