| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2137 |
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| Symbol | |
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| ID | 8253243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2461867 |
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| End bp | 2462445 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935786 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092403 |
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| Protein GI | 255532031 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.793829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0407889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAT ATACCAGCTA TTCTGATCAG GAATTAATAA GCCTATTTAT ATCTGGCAGT
GATGGCGCAT TTAAAGAAAT TTATCTGCGG TATGATAAGC TGCTTTATTT ATATGCCTAT
CATAAACTGG GCAATAAAGA AGAAGCAAGG GATATGGTTC ATGACGTGTT TGCCTGGATG
CTCAATAACC GCGAAAAACT TGATTTAAAA ACTACGCTTT CAGGTTATCT CTATAAATCA
GTGTTAAACA AGATCTTTAA TTTGTTTAAA CACCGGCAGA TCCTGAAGAA GTATGCGGAT
GCGGGAAATC ATTATATAGA TATAGAAAGT GCCGAAACAG ATTTTCTGAT CAGGGAAAAG
GATGTTGCGG CTATGATTGA AAAGGAAATC CAGGCCATGC CGCCCAGAAT GCGCGAGATT
TATGAACTAA AAAGAAATAA ACACCTTTCT GCAAAAGAAA TTGCCCTGCA ATTAGATATT
GCAGAGTCTA CCGTAACCAC ACAAATGAAA AGGGCCATGA AACATCTGAA ATTAAAACTG
GGCCTGTTGG TCTACCTGGT CTTTATCATC CACCCCTGA
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| Protein sequence | METYTSYSDQ ELISLFISGS DGAFKEIYLR YDKLLYLYAY HKLGNKEEAR DMVHDVFAWM
LNNREKLDLK TTLSGYLYKS VLNKIFNLFK HRQILKKYAD AGNHYIDIES AETDFLIREK
DVAAMIEKEI QAMPPRMREI YELKRNKHLS AKEIALQLDI AESTVTTQMK RAMKHLKLKL
GLLVYLVFII HP
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