Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2094 |
Symbol | |
ID | 8253198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2414208 |
End bp | 2414867 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644935742 |
Product | regulatory protein MarR |
Protein accession | YP_003092361 |
Protein GI | 255531989 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0118468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACG ATATTTTAAA AAATGTCATC CATCTTCTTG AAGAATTTGA GTCGGAGAAT TTTTCAGGAA AAACATATCC TAATGATATC GAAGGTTTTA AAAGATGGGT AGTTGTCAAT TATAAAAGCG CAGAAATAGA TAATGAACCC AATTGGGAAG GCAAAGAAAA GGGACGTAGT GCTGAAAGTG TCATTAATAC TTTAATCGTT CATTTGAACA GGTATGCCAA GAGTTATTCA AAATCGGCAA TATCCGGTTC AAATTTTTCT ACCCAGGAAG AATTTATTTA CCTCATTAAC CTAAAAGCAT TCGGTGAGAT GACCAAAATG GACTTGATAA AAAAGAATGT CCATGAAAAA CCTGCCGGAA TGCAGATTAT CAATCGGTTG ATTGCACAAG GCTGGGTAGA TCAAACTGAT TCTGAAACTG ACAAAAGAAG TAAAGTTTTA AAAATCAGCA ATGAGGGCAT TAAAGTTTTA GAAAATCAAA TGGGCAAAAT CAGAAAAGCA ACTGAAGTTG TGACAGGAGA TTTAACACGT AAGGAAAAAA TGGAATTAAT TAGATTACTA AATAAACTCA ATGATTTTCA TCAGCCCATC TATGATAAAA ATATTGAGCC TGAATATTTA TTAAATGAAG TTTTAAAAAA CAAAAGGTGA
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Protein sequence | MKYDILKNVI HLLEEFESEN FSGKTYPNDI EGFKRWVVVN YKSAEIDNEP NWEGKEKGRS AESVINTLIV HLNRYAKSYS KSAISGSNFS TQEEFIYLIN LKAFGEMTKM DLIKKNVHEK PAGMQIINRL IAQGWVDQTD SETDKRSKVL KISNEGIKVL ENQMGKIRKA TEVVTGDLTR KEKMELIRLL NKLNDFHQPI YDKNIEPEYL LNEVLKNKR
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