| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2061 |
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| Symbol | |
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| ID | 8253165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2378001 |
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| End bp | 2378765 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935709 |
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| Product | RNA methyltransferase, TrmH family, group 3 |
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| Protein accession | YP_003092328 |
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| Protein GI | 255531956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0954424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATT CCAGGAGACC TGCAAGAGGT AAAGAGAGTA ACGAGTTTAT ATTTGGTATA
CGTGCTGTAA TAGAGGCAAT TAAGGCTGGT AAAGAGATAG AGAGCATTTA TATACAACGG
GGCTTGACAG GCGGTATCAT TATGGAGCTG AAGGCTTTGC TGAAAGAGGT GGATGCGCCT
GTACACAATG TTCCGGTAGA GAAGCTTAAC CGGATGACCC TGAAAAATCA CCAGGGGGTT
ATTGCAGTAA TTTCGGCCAT CACCTTTCAA AAAATTGAAG ACATTATTCC TGCAATATAT
GAGAAAGGAG AAACGCCATT GGTGTTGATC CTGGATGGCA TTACCGATGT CAGAAATATG
GGTGCCATTG CCAGGACAGC TGCCTGTGCC GGTGTGCATG CTATTGTGGT ACCCAGTAAA
AATTCGGCAC AGATCAATGC TGATGCCATT AAAACGTCGG CTGGGGCTTT GTTTACCATT
CCGGTTTGCA GGCACCCGAA CTTGCATAAA ACAGCATTAT TTTTACAGGA ATGTGGTTTG
CAGATTGTAG CCTGTACAGA AAAAACCAAC GACCTGATCT ATGTGCCGGA TTATACCGCA
CCTACGGCCA TTGTAATGGG GGCAGAGGAT GAAGGGATTT CGAATGAGCT GATGCGTATG
GCAAACCACC TGGCCAAGAT CCCGATGATC GGAGAGATCA GTTCACTGAA CGTATCTGTT
TCAGCAGGGA TTATCCTTTA TGAAGCCATC AGGCAACGGC AATAG
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| Protein sequence | MENSRRPARG KESNEFIFGI RAVIEAIKAG KEIESIYIQR GLTGGIIMEL KALLKEVDAP
VHNVPVEKLN RMTLKNHQGV IAVISAITFQ KIEDIIPAIY EKGETPLVLI LDGITDVRNM
GAIARTAACA GVHAIVVPSK NSAQINADAI KTSAGALFTI PVCRHPNLHK TALFLQECGL
QIVACTEKTN DLIYVPDYTA PTAIVMGAED EGISNELMRM ANHLAKIPMI GEISSLNVSV
SAGIILYEAI RQRQ
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