Gene Phep_2057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2057 
Symbol 
ID8253161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2373803 
End bp2374540 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content44% 
IMG OID644935705 
ProductElectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_003092324 
Protein GI255531952 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0288858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT TAGTTTGTAT CAGTAACGTG CCAGACACAA CGACAAAAAT AACTTTTACC 
AACGATAATA CACAATTCAA TACATCCGGA GTTCAGTTCA TTGTAAACCC TTATGACGAG
ATCGCCCTAT CCAGGGCAAT TGAACTTTGC GAAGGTGGTA AAGGAACTGT AACTGTAATT
AATGTTGGGG AAAGCGCTAC CGAACCAACC ATCAGGAAAG CGCTTGCTAT CGGTGCCGAT
GATGCCGTAA GGATCAATGC TGCACCAAGG GATGCTTATT TTACAGCTTA TCAGATTGCT
GAATATGCCA GGAGCAATGA ATTTGACATG ATCTTATGTG GCAGGGAGTC TATCGACTAC
AATGGCTCGC AGGTTGCGGC GATGGTAGGC GAGTTCCTTG ACATCCCATC TGTTTCTATC
ATAAAAAAAC TGGATTATGA CGGAACCACA GCTACCATAG AACGTGAAAT AGAGGGCGGT
AAAGAAATCA TTTCTATAAG TGGTAAGTTT ATTGCCAGCT GTGCCGAGGG TACCGCAGAA
CCGAAAATAC CCAATATGAG GGGTATCATG TCGGCCCGCA CCAAACCTCT GCAGGTGGTT
GAAGCCAAAG AAATAGCACA ATTGAGTAAA ATACAGCAAT TTGAAACGCC TCCGCCACGC
GGAACAGTTA AATTGGTACC GGCAGAAGAT GCTGCCAGTT TAATCGGACT GTTACACACG
GAAGCCAAAG TAATTTAA
 
Protein sequence
MKILVCISNV PDTTTKITFT NDNTQFNTSG VQFIVNPYDE IALSRAIELC EGGKGTVTVI 
NVGESATEPT IRKALAIGAD DAVRINAAPR DAYFTAYQIA EYARSNEFDM ILCGRESIDY
NGSQVAAMVG EFLDIPSVSI IKKLDYDGTT ATIEREIEGG KEIISISGKF IASCAEGTAE
PKIPNMRGIM SARTKPLQVV EAKEIAQLSK IQQFETPPPR GTVKLVPAED AASLIGLLHT
EAKVI