| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1961 |
|---|
| Symbol | |
|---|
| ID | 8253065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2264429 |
|---|
| End bp | 2265073 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644935612 |
|---|
| Product | Acetyltransferase (isoleucine patch superfamily) |
|---|
| Protein accession | YP_003092231 |
|---|
| Protein GI | 255531859 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.11607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000808015 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTATCTT TGGAAATGTC ATTGACTTCT AAAATAAAAT CGAATCCATT GCTAAAGAAA
ATGGCACACT GGCTGCTCAT ACCAAGTGGC GAACACAGGC CAAGGCTTTG GGTAAGGTTA
TTTATCAATC CATTTAAACA CAAAAGGGGA AGAAAATCTA TAATTCGATC TAGGACTCGT
CTTGACGTAT TCCCTTTTAG TCAGTTTGTT TTAGGAGATG GTTCTGTAAT TGAAGATTTT
GGTACGATTA ATAATGGTGT TGGAGAGGTT ATAATAGGAC ACCGGACAAT TATTGGTTTA
GGAAATACAA TTATTGGTCC TGTTGTTATT GGAGACGATG TCATGTTAGC TCAAAATATT
GTTTTGTCAG GAATGAACCA CGGTTATCAG GACGTTACCA TACCACCAAG TAGACAAAAA
GAAATTAGAA AATTGATTAC CATAGGTGAT GCTGTATGGA TTGGCGCTAA TAGTGTCATT
ACTGCTGGGG TAACTGTTGG AAAACACAGT GTTATTGGAG CCGGAAGTGT GGTTACTAAA
GATATTCCAC CTTTTTCTGT TGCTATTGGT AATCCGGCTA AAGTGATAAA ACAGTACGAT
GAATTAAGTG GGACCTGGAA AAAGATAGAT AAGTCGTATA AATAA
|
|---|
| Protein sequence | MLSLEMSLTS KIKSNPLLKK MAHWLLIPSG EHRPRLWVRL FINPFKHKRG RKSIIRSRTR
LDVFPFSQFV LGDGSVIEDF GTINNGVGEV IIGHRTIIGL GNTIIGPVVI GDDVMLAQNI
VLSGMNHGYQ DVTIPPSRQK EIRKLITIGD AVWIGANSVI TAGVTVGKHS VIGAGSVVTK
DIPPFSVAIG NPAKVIKQYD ELSGTWKKID KSYK
|
|---|
| |