Gene Phep_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1959 
Symbol 
ID8253063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2262866 
End bp2264311 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content35% 
IMG OID644935610 
Producthypothetical protein 
Protein accessionYP_003092229 
Protein GI255531857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0214435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000109824 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCAAT TTTTTAATCA ATTGCCTTTT AGTTTAAAAA GGATCTTGTT TGTCATTATT 
GGTTTGATTT TGACAACGGC GATTAGTTTT TTTTCATTCC AATTGGGAAT TATTGTCCCC
TTAATTGCGA TAGGTTTATC CGCTGCTGTT ATTTTTCTGA TCATTAGCTT TAATCATCCT
AAGATCACAT TATGGGCTTT AATTTCCTAT TGCTTCTCCA TTGCATTGAT AAGTAGAGAA
ATTGGCGGGG ATATTCCATA TGGTACATTC ATAGAAGTAT TGTTATTTCT CACCTGGTTA
TTTGCAGTAC TCAGGGTGCC GGTTGAAGAA TGGAAGAAAG TTAAGAATGA TCTTTTTTAT
ATAATAGTAA TTTGGTTTTT ACTAAGCGTT TTAGAGGTAG CAAATCCGGC GGGGGCAAGT
ATAATGGGTT GGTTACAGGA GATCAGATCG GCAGCACTAT ATCCTTTGTT AATTATACCT
GTCACCTATG TTTTATTTAA TACTAAGAAA GACCTAGATT CTTTTTTAGT ATTAGTAATT
GTCTTTTCCG TATTTGGAGC AATAAATGGT ATCAAACAAT TATATATTGG TCTTTCACCC
GGCGAACAAC GGTTTATTGA CGACGGAGGT TACGTTACCC ATATGTTATT CGGTCAGCTA
CGCGTGTTTT CATTTTATAG TGAAGCGGCC CAATTTGGAG CTTCTCAAGC GCATATCGGT
TTAATATGTC TTATTTTAGC CTTTGGGCCT TACAAATGGT GGAAAAGAGC TTTATTATTT
TGTATTTCTC TTCTTTTGCT TTACGGGATG CTTATTTCTG GTACAAGAGG AGCACTTTTT
GTGCTGGTAT CTGGTGTATT TTTAGCAATA ATATTGAGTA AGCAAATAAA GGTCATTCTT
ATAGGTGGGC TTATTGCCTG TTCTTGTTTG TTTATACTTA AATTTACTTA TATAGGAAAT
GGAAATTATC AGATTTACCG TTTAAGAAGT GCTTTAGACC CTACGGATGC ATCATTTAAT
GTAAGGCTTA ACACTCAAAA ATTGCTTAGA GAGTATATGA GTACCAGGCC TTTTGGGGGC
GGACTTGGTG TTATTGGAGC CTGGGGAGCA AAGTATAACC AGGATAAGTT TTTAGCGCAT
ATTCCTCCAG ATAGTTATTG GGTAAAGGTA TGGGCAATGT ATGGAATAAT AGGTTTTATA
ATATGGCTGT GTATCATGAT GTATATCCTG GGTAAATGTT GTGGTATTGT TTGGAACATC
AGGGATCCGG ACCTAAGAAT AAAAGGGATA GCAATGACAT CTGGTTATGC CGGTATTTTA
ATTTGTAGTT ATGGAAACGA AGTTATTAAT ACAATGCCAT CCTCAATAAT TGTATATGTT
TCATGGGTGT TTATATTTAT AAGTCCAGTT TTAGATAAAG AAATATCAAA TAAAAATAAT
TTGTAA
 
Protein sequence
MMQFFNQLPF SLKRILFVII GLILTTAISF FSFQLGIIVP LIAIGLSAAV IFLIISFNHP 
KITLWALISY CFSIALISRE IGGDIPYGTF IEVLLFLTWL FAVLRVPVEE WKKVKNDLFY
IIVIWFLLSV LEVANPAGAS IMGWLQEIRS AALYPLLIIP VTYVLFNTKK DLDSFLVLVI
VFSVFGAING IKQLYIGLSP GEQRFIDDGG YVTHMLFGQL RVFSFYSEAA QFGASQAHIG
LICLILAFGP YKWWKRALLF CISLLLLYGM LISGTRGALF VLVSGVFLAI ILSKQIKVIL
IGGLIACSCL FILKFTYIGN GNYQIYRLRS ALDPTDASFN VRLNTQKLLR EYMSTRPFGG
GLGVIGAWGA KYNQDKFLAH IPPDSYWVKV WAMYGIIGFI IWLCIMMYIL GKCCGIVWNI
RDPDLRIKGI AMTSGYAGIL ICSYGNEVIN TMPSSIIVYV SWVFIFISPV LDKEISNKNN
L