| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1931 |
|---|
| Symbol | |
|---|
| ID | 8253035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2233348 |
|---|
| End bp | 2234310 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644935582 |
|---|
| Product | FecR protein |
|---|
| Protein accession | YP_003092201 |
|---|
| Protein GI | 255531829 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.167252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0413006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATG AATTATTGAT AAAGTTTCTG CTAAAAGAAA CAAGTGAAGA GGAAGGCATA
GCCGTACAAA ACTGGTTAGA CGCCGCTCCT TCCAATGCAA AACATTTTGA ACAGTTTAAA
CAAATATGGA ACAGCAGTAA AAAGCTTTCC ACCCAAAGCA ATGTTAACGG AGATGAAGCC
TGGCTAAGGT TTAAACAAAG AGCATCAGCC GCGCATCAGC CCCTTGTACG CCGCATAAAA
CCAACCTACC AATGGCTTAA AATTGCAGCC GTTCTTTTCC TCATTGCTGC TGCATGGTCT
GTATACAGTA TCTTTTCACC GGTTTCCTAT ACCCCCATAA CCGCTGGCAA CACCATAAAC
AAACAATTGC TCCCCGATGG GTCTGAAGTT ACACTCAACA AAAACACCCA ACTCAGCTAT
GCAACTAATT TTAAAAAAAA CAGAAGCGTC CATCTGCAGC AGGGTGAAGT ATTTTTTAAC
GTACTGCACG ATAAAACCCG GCCATTTGTA ATTGATGTAG ACAAAATTGC TGTACTTGTA
GTGGGTACCT CCTTCAATGT AAAACACTTA AACCACCAAA CTGAAGTTAT TGTCGAGACC
GGAATCGTAA AAGTAAGCCT TGGCAAGGAT GAAATAGCCC TTCACAAGGG AGAAAAAATA
ATCATAAAAA ACACAACCGA CAAACTGGTT AAAATGCAAA GTACAGATCA GCTGTACAAT
TATTACCGCA GCAACGAATT TGTATTGAAC AATACCCCTT TATGGCGTGT AGTTGAAGTT
TTAAATGAGG CTTATAATTC AGAAATCGTG ATTAAAGATC CGGCCATAAG AGACCTGACC
TTATTTACAA CTTTAAAAAC CACAGCAAGT TTAGCCGATA ATTTAAAAAC AATCTGTCTT
ACGCTTGATT TAAAGTCTGT CCGTAACGAA AACCAGCTCT TGTTGTCTAA AAATACCAAA
TGA
|
|---|
| Protein sequence | MTDELLIKFL LKETSEEEGI AVQNWLDAAP SNAKHFEQFK QIWNSSKKLS TQSNVNGDEA
WLRFKQRASA AHQPLVRRIK PTYQWLKIAA VLFLIAAAWS VYSIFSPVSY TPITAGNTIN
KQLLPDGSEV TLNKNTQLSY ATNFKKNRSV HLQQGEVFFN VLHDKTRPFV IDVDKIAVLV
VGTSFNVKHL NHQTEVIVET GIVKVSLGKD EIALHKGEKI IIKNTTDKLV KMQSTDQLYN
YYRSNEFVLN NTPLWRVVEV LNEAYNSEIV IKDPAIRDLT LFTTLKTTAS LADNLKTICL
TLDLKSVRNE NQLLLSKNTK
|
|---|
| |