Gene Phep_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1928 
Symbol 
ID8253032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2230552 
End bp2231322 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content42% 
IMG OID644935579 
Productprotein of unknown function DUF72 
Protein accessionYP_003092198 
Protein GI255531826 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0869752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0349575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATG TTAAAGGTAC ATATTATTCT GGTACCAGTG GTTTGTTATT GCCCGTACCC 
AACAAAGAAT TTTATCCGGA AGAATTTAAG GCCGGGAGCA GATTGGGTTA TTATGCTTCC
CTTTTTAACA GTATAGAGAT CAATAGCACG TTTTATAAAA TGCCCATGGC TTCGACTGTT
GCCAGATGGG CGGCAGATAC GCCAGCAGAC TTTAAGTTTA CCTTTAAATT GTGGCAGGAA
ATTACACATA AGAGGAACCT TGATTTTGAA CCTGAGGCAG TTGCAGAATT TATGAATCGG
ATTGCCAGTG CGGGCAGTAA AAAAGGTTGT TTGCTGGTAC AGTTCCCCGC CAGCATTAAG
CCTGTACATA TCCGGGAGTT AACTGAACTT TTGAACTGCA TACGCAAGGC AGATCCTGAT
CTGTTGTGGC ACATAGCTGT TGAATTCAGG CACCAAAGCT GGTATCGGCA GGATACCTAT
GACTTGCTGG AGGAATTCAG TATGGCCCCC GTTCTTCATG ATAAACTTAG CGAAGGGGGA
CAGTTACTCA ACAATTCGCT TGATTTTGTA TATCTGCGTT TTCATGGGCC TGAGGGAGAT
TATAAGGGAA GTTATCCGGA TGATTTTTTA TATGAATATG CGACTTATAT CAGGGACTGG
CTGGTGGAAG GAAAAGAGGT TTATAGCTAT TTTAACAATA CGATGGGCAA TGCGATCGGA
AATATGGAAT TGTTAAGGAA GTATGTGCAC AATAATGCAG ATAATTTATG A
 
Protein sequence
MEYVKGTYYS GTSGLLLPVP NKEFYPEEFK AGSRLGYYAS LFNSIEINST FYKMPMASTV 
ARWAADTPAD FKFTFKLWQE ITHKRNLDFE PEAVAEFMNR IASAGSKKGC LLVQFPASIK
PVHIRELTEL LNCIRKADPD LLWHIAVEFR HQSWYRQDTY DLLEEFSMAP VLHDKLSEGG
QLLNNSLDFV YLRFHGPEGD YKGSYPDDFL YEYATYIRDW LVEGKEVYSY FNNTMGNAIG
NMELLRKYVH NNADNL