Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1824 |
Symbol | |
ID | 8252927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2119522 |
End bp | 2120157 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935474 |
Product | hypothetical protein |
Protein accession | YP_003092094 |
Protein GI | 255531722 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000348274 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000080896 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTAAACA ACAAAATCGC TTTTGCAAGG CTGATGGCCT TGCTGAAAAG CATAGACCCG GATATACCGC TGCCTGCGGG GCTGGAAGAC TATCTATGGG AAAACATGAT AGTAGAGGCA ATTTGTAACA AAGCCTGCCG GATTGAAGAA GAAAACAAAA TACCCAAAAA AGCTTATTAT GTAGTGCGTG GCTTTGTGCT GGTATATGGC TACAACCATG AACAGGACAG GTACCTGTTT CGCATTTACC GCGAAAACAG CATTGTGGCA ATGGACTGCT TTATGCGGCA GCAAGTATCG CCTTATTGCA TCTGGCTTTG TAAGGATACC CTGCTCTGGA GCATCAGCAG TGCCTGCATG GATGCTGTTT ATAAGCATTG GGATGGTATG AAAGCATTTG CCTTTAAAAC TTCATCTAAA CACAATGCGG CCAAGGAGCA GTCGCGTGCT TCATTATTAG GGATAGAAGA TATAGAAACG CGGATCCTTG AATTTTATAA AAGGTATAAA GGCTTGCTGC CACCAAAGAA AAGCCCGATA AGGGATACCT GTATTGCCTG TTTTTTGAGC ATGACTATAA ATGTGCTCAG AAAAAACAGA CGCAAACTAA AAAATAAAAG TTTGTTAAAA TACTAG
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Protein sequence | MLNNKIAFAR LMALLKSIDP DIPLPAGLED YLWENMIVEA ICNKACRIEE ENKIPKKAYY VVRGFVLVYG YNHEQDRYLF RIYRENSIVA MDCFMRQQVS PYCIWLCKDT LLWSISSACM DAVYKHWDGM KAFAFKTSSK HNAAKEQSRA SLLGIEDIET RILEFYKRYK GLLPPKKSPI RDTCIACFLS MTINVLRKNR RKLKNKSLLK Y
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