Gene Phep_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1799 
Symbol 
ID8252902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2092795 
End bp2093952 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content42% 
IMG OID644935450 
ProductFecR protein 
Protein accessionYP_003092070 
Protein GI255531698 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00110376 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTTTT CAGATCAATT TTTAAGGGCT ATAAATCGCT ACTTCAATGG TACTGCCAGC 
GAAGCAGAAA AGGATATGAT TAACAAATGG TACCATTCGC ATGATGATGC CACAGTAAAC
GTTGATGTAA ACCAAGCCGA TTATGAGCAA ATATTAGAAA GCCGGCTGAA ACAAAGAATT
AAAGAAAGTA TAGGTATCCA ACCAGTAAAG CAGAGACGCT TGTGGCCTCG TATAGCATTG
GCCGCCGCTG CGGTAGCAGC CATTGTGTTT GGGGTGTTCT TTTTTAAAGC GCCAGGTAAA
CCTGAACCTG GTTCAGGAGC TACAAACTAT ACAAACGACA TTGCCCCGGG TAAAAACACC
GCCACCCTTA CCCTTGCCAA TGGTAAAACC ATAGTCCTAA GCGATGTTAA AACCGGGGTA
ATTGTTGGTG TGAATAAACT AACCTACAAT GATAACACCG TCATCTCGAC CGAAGGGAGA
GATCTCTCGT CGCTTCGCTC TGTCGAGATG ACGAGTTTAA GCACCCCACG TGGCGGCACC
TACCAAATCA CTTTACCCGA TGGCAGCCGA GCTTGGCTTA ACGCCGACAC AAAAATTTCT
TTCCCGTCAC AATTTATTGG TAAGGAACGC AAAATTTTGA TAATAAATGG AGAGGTGTAT
TTTGAGGTGG CTAAAAATAA GGAGAAACCT TTTATAGTAG TAGCAGATCA ACAAGAAGTA
GAGGTACTGG GTACACATTT TAACATTAAT GCCTATAAAG ATGAAGGCAG CACTAAAACC
ACTTTGTTAG AAGGGAGTGT GAAAGTATCC TTACTTAGTG GGAAGCGTAG CGATGAGGGA
ACAGTAATAT TAAAACCTAA CCAACAATCC CTTGTCACGG GTAGCCAGGG GATAGCTGTA
AAGGAAGTAG ACGCTGCCGA AGCCATAAGC TGGAAGAACG GCAAGTTTAG CTTTGAACGT
GAAGAGATGA GTAGCATTAT GCGCAAGGTA GCACGATGGT ACAATGTAGA TGTAGTTTTT
CAGGAGCCAC TACAGGAAGT AAAGTTAACG GGAAGTATAT CCAGGTTTGA GAAAGTGTCT
AAACTATTGG AAATGCTGGA AAACACAAAA GAAGTACGTT TTAAAATAGA GGGGCATAAA
GTGTACGTAA CTAAATAA
 
Protein sequence
MQFSDQFLRA INRYFNGTAS EAEKDMINKW YHSHDDATVN VDVNQADYEQ ILESRLKQRI 
KESIGIQPVK QRRLWPRIAL AAAAVAAIVF GVFFFKAPGK PEPGSGATNY TNDIAPGKNT
ATLTLANGKT IVLSDVKTGV IVGVNKLTYN DNTVISTEGR DLSSLRSVEM TSLSTPRGGT
YQITLPDGSR AWLNADTKIS FPSQFIGKER KILIINGEVY FEVAKNKEKP FIVVADQQEV
EVLGTHFNIN AYKDEGSTKT TLLEGSVKVS LLSGKRSDEG TVILKPNQQS LVTGSQGIAV
KEVDAAEAIS WKNGKFSFER EEMSSIMRKV ARWYNVDVVF QEPLQEVKLT GSISRFEKVS
KLLEMLENTK EVRFKIEGHK VYVTK