| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1685 |
|---|
| Symbol | |
|---|
| ID | 8252787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1992483 |
|---|
| End bp | 1993121 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644935337 |
|---|
| Product | phospholipase/Carboxylesterase |
|---|
| Protein accession | YP_003091958 |
|---|
| Protein GI | 255531586 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0400] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0645369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.777462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACACCC ATCAAAAAAA CAGCATTACA GCCGGGGTTC CGGTAGCCGA AGCAAAAAAA
GCAGTTATAT TCATTCATGG AAGAGGGTCG TCAGCCGAAG ACATCCTCTC CCTGAACAAT
CACCTGGGTA TTAAAGATGC TGCCTTTTTT GCACCCCAGG CTACCAACAA CAGCTGGTAT
CCATATAGTT TTATGGCACC TGTTAAGGAA AATCAGCCAG CACTGGATTC CGCACTGGGT
CTGATCAAGG AACTGGTAGC TGAGATTGAA AATGCAGGAA TTCTGCAGGA TCAGATTTAC
TTCGTAGGTT TCTCACAGGG TGCCTGCCTA ACGTTGGAAT ACATCACCAG AAATGCGGGT
AAATATGGTG GTGCAGTAGC GTTTACCGGC GGACTGATCG GCAAAGAGAT TAACATGCAA
AATTACAAGG GCAACTTTAA ACAAACGCCG GTGCTCATTA CTACCGGCGA TCCCGATCCA
CATGTACCGG TTTCAAGAGT GGAGACAAGC AAAGGTATTC TTGAAAAAAT GAATGCCATG
GTTAGCCTAA AAATTTATCC AGGCAAACTG CACACCATTA GTAAACAAGA AATTCTTTTG
GCCAAAGAAA TAGTATTTGA CTCGAACCAG CTACGTTAA
|
|---|
| Protein sequence | MYTHQKNSIT AGVPVAEAKK AVIFIHGRGS SAEDILSLNN HLGIKDAAFF APQATNNSWY
PYSFMAPVKE NQPALDSALG LIKELVAEIE NAGILQDQIY FVGFSQGACL TLEYITRNAG
KYGGAVAFTG GLIGKEINMQ NYKGNFKQTP VLITTGDPDP HVPVSRVETS KGILEKMNAM
VSLKIYPGKL HTISKQEILL AKEIVFDSNQ LR
|
|---|
| |