| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1662 |
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| Symbol | |
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| ID | 8252764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1965607 |
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| End bp | 1966182 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935314 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003091935 |
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| Protein GI | 255531563 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.19397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGACAGT TAAAAACAGG GAAAATAACC AAGTATAGCG CACTTTCTGA TAAAGAATTG
GTTGGCCTTT TGCAGGCTTC AGACTATATT GCCTTTACAG AAATCTACAA CAGGTTTGCT
GGTATTTTGT ATGTTTTTGT CCGTAAACGG ATAGGTGATA AAGATGACGC ACAAGACATT
CTCCAGGAGC TTTTTACAGA TCTGTGGGTT AAGCGGGAGC TGGTTAACAT CAAAGGAGAA
ATAACCCCCT ATCTTTATGC AGCTGTCCGA TACAAAATGA TCGATTTTAT AGAACGTAAT
GCTACCCAAA AGCGGTATAT TGATGCGATA GAAAATTTCA AGGATCAGGA AACTGTAATG
ACTGATCACC TGGTACGCGA AAAGCAACTG GCCGCCTTAA TTGAAAAACA GATAGATCAG
CTCCCCAAAA AGATGCGCGA GGTATTTCTG CTAAGCCGTA ATGCAAACCT TACCTATAAC
GAAATTGCCC AGGAATTAGA CCTCTCCAAA CAAACCATCA GGGCTCATGC AAAAAACGCA
ATAAAGATTT TACGGTTAAA GCTGGGCTTA ATGTAA
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| Protein sequence | MGQLKTGKIT KYSALSDKEL VGLLQASDYI AFTEIYNRFA GILYVFVRKR IGDKDDAQDI
LQELFTDLWV KRELVNIKGE ITPYLYAAVR YKMIDFIERN ATQKRYIDAI ENFKDQETVM
TDHLVREKQL AALIEKQIDQ LPKKMREVFL LSRNANLTYN EIAQELDLSK QTIRAHAKNA
IKILRLKLGL M
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