Gene Phep_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1660 
Symbol 
ID8252762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1964151 
End bp1965377 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID644935313 
ProductFecR protein 
Protein accessionYP_003091934 
Protein GI255531562 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.15586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG ATCATTTATA TGAATTATTA AGGAAATACA AAAGCGGCCT TTGCAATGCA 
GAGGAAAAAG CTATTGTAGA AAATTGGTTT CTTACCCTTG GGGAAGAACC AACCGAATAT
TCAGAAGATG AGATTGAACA CAGCCTGGAA GAAATATGGG AAGCCATGCC CACTAACCAG
ATTCCTGTAA AAAAAATCAA CTGGCCTCTT CGTGTAGCTA CAATAGCTGC AGCCATTGTA
GTGATGCTTG GTGTATGGAC TTTACTGTTT GTTAAAACAC CTTCACAGAC AGATTGCAAT
TGTGATGAGG ACATTAAACC CGGAACGAAC ACAGCAACCC TAACCTTGCC CAACGGAAAA
AAAATTGACC TGAGCGATGT TAAAAACGGA GAGCTGGCGA TAGATCAGGG TGTAAAGATC
ATTAAACAGT CAGACGGACA ATTGCTTTAC CAGTTTAACC CCGATGCGGT TAAAACCATC
ACTCCAGGGC AAAGAGACTC TGTCCCTGCA TTGGTATTGC CTGGAGGTTC TTCCTCAAAT
CCCTTAAGTG GCTTAAATTC TTTAACCACC CCAAAGGGAG GACAATATCA TATCGCCCTA
CCCGATGGCA CCAATGTTTG GCTCAATGCC GGTTCTACAC TTAAATTCCC ATCTACTTTT
GAAGGGCTTG CCGAACGCAG AGTATTACTC ATTGGTGAGG CCTACTTTGA GGTATCTCAT
GTAAAGTCCC TGTTTGGCAT GCAAAAACGG GCAAGAAAAA TGCCTTTCAT CGTTAAAACT
GCTACCCAGG AGGTGACCGT ATTGGGCACC CATTTTAATA TTAACAGTTA TCCGGACGAA
CCGGACACTA AAACAACGCT GCTTGAAGGG GCTGTAGGAA TTACGGCCCC TCTTTTACAA
AAAGAGACAA CTATCCTTAA ACCCGAAGAT CAGGCCGTAA ACAACGGTGC TGAAATCAAA
GTTAAAAAGG TAGATACAGA TTTGGCTGTA GCATGGATAA AGGGCGAATT TATGTTCAGG
AATGAAGACC TGCAGAGCAT TATGAGAAAG GTAGCACGTT GGTATAATGT AGAGGTGATC
TATGAAAACA AAGATGCCGG TAATGAAATG TTTGGGGGAA CAATTTCACG GTATGATAAA
ATATCCAGGG TATTAAATGC CCTCGAAGGA ACAAGTAATA TAAGATTTAA GGTAACCGGA
AGAAAAGTTT TCGTTACCAG GCTGTAG
 
Protein sequence
MEKDHLYELL RKYKSGLCNA EEKAIVENWF LTLGEEPTEY SEDEIEHSLE EIWEAMPTNQ 
IPVKKINWPL RVATIAAAIV VMLGVWTLLF VKTPSQTDCN CDEDIKPGTN TATLTLPNGK
KIDLSDVKNG ELAIDQGVKI IKQSDGQLLY QFNPDAVKTI TPGQRDSVPA LVLPGGSSSN
PLSGLNSLTT PKGGQYHIAL PDGTNVWLNA GSTLKFPSTF EGLAERRVLL IGEAYFEVSH
VKSLFGMQKR ARKMPFIVKT ATQEVTVLGT HFNINSYPDE PDTKTTLLEG AVGITAPLLQ
KETTILKPED QAVNNGAEIK VKKVDTDLAV AWIKGEFMFR NEDLQSIMRK VARWYNVEVI
YENKDAGNEM FGGTISRYDK ISRVLNALEG TSNIRFKVTG RKVFVTRL