Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1645 |
Symbol | |
ID | 8252747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1945664 |
End bp | 1946650 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644935298 |
Product | hypothetical protein |
Protein accession | YP_003091919 |
Protein GI | 255531547 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.946237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0144499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAAA GAATGATAGG CCTATTGAGC ATCGCAGGTA TGATATCTAC TGCCAGCGCG CAGCAGGACA GCCAGTATAC ACAGTATATT TTTAATGGTA TCCACATCAA TCCGGCCTAT GCCGGTTATA AAGGCGATAT CTATGTACAG TCTTTTTACC GCTCACAATG GGCAGGCATT AAAGGGGCCC CGAAAACTTT TTCTGTTGCA GCTGATGGGG CTTTTTATGA CGACAAGGTT GGACTTGGAC TAATCGTTTC CAACGATCAG CTGGGGGCAC AAACTTACCT TACAGCTTAT GCAAACTATG CCTACCACAT TAAAACCGGA TATAGTGGAA CCGGACAACT TTCTTTTGGC ATTGCAGCCG GTATGGTACA GATGGGCCTG GATGGCACCA AACTGGAAGG GTACAAGCCG GGTGATGAGC TGATTCCTGT TGGCTCGCAG ACCAGTACCG TACCCGACGC CCGCTTTGGG ATCTATTATG CCAACGAAAG CTTCTTCCTG GGCCTTTCCA TGACCAATAT GCTGGCCCGG TACCTGGCAA AAAGAAATAC CGAAGACAGC AGGATACCCG TTCCCCAGCC GCATTTGTAC TTCAGCGCAG GAGCGCTGTT CCCATTCAGT GAAGATGTTA AATTTAAACC GGTCATCCTT TTTAAAGATG ATACCAAAGG CCCCTCGGCA ATGGACATCA CTACCTTTTT GCTGCTTAAG GACAGGCTCT GGATCGGCGC TTTTGCCCGT ACTTCATTCG ATCTTTACAA AAAAGACTAT CAGCAAAAAG GACTGGCCAA AGAACACGCA ATGGGTGGCA TACTTGAGGT TTTTGCGACG GAAAATATCA GGATTGGCTA TTCGTACGAT TACTCCCTCA ATAAATTGCG CAATTACAAC TACGGCAGTC ATGAGCTATC CGCAGGCTTT TACATCAATC GCCGAACTAC TGCTGAAAGA AGGCAGTTGA GGTGTAATAG GTTTTAA
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Protein sequence | MMKRMIGLLS IAGMISTASA QQDSQYTQYI FNGIHINPAY AGYKGDIYVQ SFYRSQWAGI KGAPKTFSVA ADGAFYDDKV GLGLIVSNDQ LGAQTYLTAY ANYAYHIKTG YSGTGQLSFG IAAGMVQMGL DGTKLEGYKP GDELIPVGSQ TSTVPDARFG IYYANESFFL GLSMTNMLAR YLAKRNTEDS RIPVPQPHLY FSAGALFPFS EDVKFKPVIL FKDDTKGPSA MDITTFLLLK DRLWIGAFAR TSFDLYKKDY QQKGLAKEHA MGGILEVFAT ENIRIGYSYD YSLNKLRNYN YGSHELSAGF YINRRTTAER RQLRCNRF
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