Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1604 |
Symbol | |
ID | 8252706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1899723 |
End bp | 1901051 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644935258 |
Product | xylose isomerase |
Protein accession | YP_003091879 |
Protein GI | 255531507 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC TTACTGCAGA CAACGAATAT TTCAAAGGGA TCGGACAGAT CAGCTTTGAA GGACAGGAAA CAGACAACCC GCTGGCTTTC AGATGGTACA ATCCTGAACA GGTGGTTGCC GGCAAAAAGA TGAAAGAGCA CCTGCGTTTT GCCGGTGCTT ACTGGCATTC TTTCTGCGGA AATGGTACAG ATCCCTTTGG CGGTCCGACA CATATTTTTC CCTGGGACGC GAAAGCGGAT GTACTGGATC GTGCAAAGGA CAAAATGGAT GCAGCCTTTG AATTTCTGAC CAAAATGAAC CTGCCCTATT ACTGCTTTCA TGATGTGGAT GTGGTAGATT ATGGCAACGA CATCAAAGAA AATGAAAGAC GGATGCAGAT CATGACCGAT TATGCAAAAG CCAAACAGGC AGAAACAGGT GTAAAATTGC TTTGGGGTAC GGCTAATCTT TTCTCTCACC GCAGGTATAT GAACGGAGCG GCTACCAATC CCGACTTTCA TGTGCTGAGC CATGGCGCAG CACAGGTAAA AGCAGCCCTT GATGCCACCA TAGCCCTTAA TGGGGAAAAT TATGTATTCT GGGGTGGCCG CGAAGGTTAC ATGAGCCTCC TGAACACCAA TATGAAACGC GAACAGGAAC ATCTGGCAAA ATTTCTGCAT ACAGCCAAAG ATTATGCCCG TAAAAATGGT TTCAAAGGCA CCTTCTTTAT TGAGCCCAAA CCTTGTGAAC CCACCAAGCA CCAGTACGAT TACGATGCAG CAACCGTACT TGGCTTTCTC CGTCAGTACG ACCTGCTGGG TGATTTTAAA CTGAACCTGG AAGTTAACCA TGCTACGCTG GCCGGACATA CCTTCCAGCA TGAGCTGCAG GTGGCTGCTG ATGCCGGAAT GCTGGGCTCT ATTGATGCCA ACCGCGGCGA CGAACAAAAT GGCTGGGATA CAGACCAGTT TCCAAACAAC ATCAATGAGG TTACAGAATC CATGCTGATC ATCCTGGAAG CAGGGGGCCT GCAAGGTGGG GGTATAAATT TCGATGCCAA GATCCGCAGG AATTCAACGG ATCCGGCCGA CCTTTTCCAT GCACATATTG GTGGAATGGA TATTTTCGCC CGGGCCCTGA TTACCGCCGA CCGCATCCTT CAGCATTCTG AATACAAAAA AATAAGGGCA GAAAGATATG CGTCTTACGA CAGTGGAAAA GGCAAAGCCT TTGAAGAAGG GAGCTTAAGC CTGGAAGACC TGCGCGATTA TGCAGTGGCA CAGGGCGAAC CGCAAACCAT CAGCGGCAAA CAGGAATTCC TGGAAAACCT GATCAACAGG TATATTTAA
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Protein sequence | MTKLTADNEY FKGIGQISFE GQETDNPLAF RWYNPEQVVA GKKMKEHLRF AGAYWHSFCG NGTDPFGGPT HIFPWDAKAD VLDRAKDKMD AAFEFLTKMN LPYYCFHDVD VVDYGNDIKE NERRMQIMTD YAKAKQAETG VKLLWGTANL FSHRRYMNGA ATNPDFHVLS HGAAQVKAAL DATIALNGEN YVFWGGREGY MSLLNTNMKR EQEHLAKFLH TAKDYARKNG FKGTFFIEPK PCEPTKHQYD YDAATVLGFL RQYDLLGDFK LNLEVNHATL AGHTFQHELQ VAADAGMLGS IDANRGDEQN GWDTDQFPNN INEVTESMLI ILEAGGLQGG GINFDAKIRR NSTDPADLFH AHIGGMDIFA RALITADRIL QHSEYKKIRA ERYASYDSGK GKAFEEGSLS LEDLRDYAVA QGEPQTISGK QEFLENLINR YI
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