| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1580 |
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| Symbol | |
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| ID | 8252682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1868236 |
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| End bp | 1868976 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644935234 |
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| Product | Endopygalactorunase |
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| Protein accession | YP_003091855 |
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| Protein GI | 255531483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0687608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATC TTATCATCAT TTTATTCATA CACCTCTGCT TCCTGAGCCC ATTAAAGGCA
CTGGAATATA ATGCATCTTT ATTTGGATGT GTATCAGATG GTGTCACCAA CAATACATCG
TCCATTCAAT ATGCGATCAA CTTTATAGCA GAAAAGGGAG GAGGCAAGTT AAATTTTTAT
GTGGGACGTT ATTTAACCGG AGGAATACAG TTAAAATCGA ATGTTACTAT TGAACTTCAT
GAGGGAGCAG TATTGCTGGC CAGTCCAAAT TTCTATGATT ATTTAAAAAA TAGTTCAGGA
TATGCTTTAA TTAATGCTGA AAAAGCAGAA AATGTCAGCA TCATCGGTAA GGGAGTGATC
CAGGGACAGG TAGGGCCTTA TCTCACCCAG TTAAATGACT TAATTTTAAA AGGATATTTA
CCGGATAACA AGGAGGTGTA TATGCCGTCA TTGCTGTCAT TTACAAATTG TACTCAGGTA
AAGGTGGACG GAATTTTCTT TAGCAACTCG CCCGCGGTTG TGCAAAAGTA TGTAGGTACT
AATGATTTAG AGCTTTCAGG TCAGATTATT AACAGTAAAG TGGCAAAAGA CAGTAAAGGA
ATTGTACTCA TAAATTCAAA ATCCATCAAG TTAAAAAACT TGTTCATCGA GACCTCCGGA
AGGGGGATTG AATCGGATAA CAGCAATCAA TTCTCGTCAG TAGAGAAATG TATTTTACCC
AATGGAAAAC CTGCTTTATA A
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| Protein sequence | MKNLIIILFI HLCFLSPLKA LEYNASLFGC VSDGVTNNTS SIQYAINFIA EKGGGKLNFY
VGRYLTGGIQ LKSNVTIELH EGAVLLASPN FYDYLKNSSG YALINAEKAE NVSIIGKGVI
QGQVGPYLTQ LNDLILKGYL PDNKEVYMPS LLSFTNCTQV KVDGIFFSNS PAVVQKYVGT
NDLELSGQII NSKVAKDSKG IVLINSKSIK LKNLFIETSG RGIESDNSNQ FSSVEKCILP
NGKPAL
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