Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1550 |
Symbol | |
ID | 8252652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1834860 |
End bp | 1837334 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935204 |
Product | primosomal protein N' |
Protein accession | YP_003091825 |
Protein GI | 255531453 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.764668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.503728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTG AACTGCTGGA ATTCAGTGAA AGGGAAACCT TGTTTGTAGA GGTGATTCTG CCTCTGTCGC TGGCTAAAAA CTATCTGTAT CGTGTGCCAT TCGACTTGAA CAGTGAAGTG GCCATTGGCA AAAGGGTGGT GGTGCAGTTT GGAAAGAACA AGATTTATAC CGCCTTAATT AAAACCATTA GCCAAACCGC CCCCAGGCTT TATCAGGCCA AATACATTAT TGATGTGGTA GATGAGCAAC CTGTGATTAC CACTTTACAA TTGCAGCTGT GGGACTGGAT GACAGGTTAT TACCTTTGCA ATGAAGGGGA TGTAATGTCG GCCGCTCTTC CAACCGGATT AAAACTGGCA AGTGAAACCA TTATTGTGCT GAAAGAAGAG GCGTTGCAGG AAAAGGTTTT AACAGAAAAG GAACGTATTC TGATGGATGC TTTGAATCAT CAGAAAAGGC TTACTATAGC TGATGTTTCT GCTTTACTTG GGCAAAAAAC AGTATATCCC ATCATCAATA CCCTGCTGGA AAAAGCATTG GTATATGTTG CTGAAGAAGT GGTAGAGAAA TACAGACCAT TGCTAAAATC TTTTGTGGCA TTAAATGCTT TTTATAGGGA AGAAGAAAAT TTAAAGCAGT TGTTTACCAT TCTGGAACGT GCACCCAAAC AACTGAATGC GCTGCTTACC TTTATCAAGT TGTCCCGACA GCAAAACTTG GTTTCAAAAT CACAATTACT GGAAGAGAGC GATTGCGGAC AGGCGGCTTT TAAAACACTG CTGGATAAGG AAATATTTAC GGTCGAAAAA AGACCGGTGA GCCGCTTAAA AGATAATGAT GAGGACTTTG TACTGAACTT TGAACTGAGT GCAGCTCAGC AACAGGCTTT GACCGGGATT GAAATGGAAT TTGAGCGGAA AGATGTGGTA TTGCTGCATG GCATTACTGC TTCCGGAAAA ACCCAGATCT ATATTAAACT GATTGAAAAG GCCATTGAGC AGGGCGGGCA GGTTTTGTTT TTATTACCCG AAATTGCTTT GACCACTCAG ATTGTTCAGC GCATACAGCG TTATTTTGGG GATGCTATTG GGGTTTATCA TTCTAAATTT AACAACAATG AGCGGGTCGA GATCTGGAAT AAAGTATTGA ACGGGAAGTA CCGGGTAGTA CTTGGGGCCA GATCAGCAGT GTTTTTGCCT TTTAAAGAGC TGAAATTGAT CGTGGTTGAT GAGGAACATG AATCCTCTTA TAAGCAGCAG GAACCCTCGC CAAGGTACCA GGCCAGAGAT GTGGCTGTTT ACATGGCCCA TTTGCACCAG GCTAAAACCG TACTGGGCTC GGCCACGCCA TCCATAGAAA GCTATTACAA TGCCATTAGC CAAAAATATG GTCTTGTTAC TTTAAATGAA CGCTTTGGTG GAGTAGAATT GCCTTTGCAT GAAGTGGTGA GCATTTCGGA AGAAACGAAG AAAAAAAAGA TGGTTTCTTA TTTTTCCGGT AAACTGATTG AAGGGATTAG CCTTGCCCTG GAACAAAAAG AACAGGTAAT CCTGTTTCAG AACCGCAGAG GCTATGCAAC TATACTGATC TGTGCCACTT GTGGTTATGC ACCCAAATGT GTAAACTGTG ATGTTTCTTT AACCTACCAT AAAACCAGCG GTAAATTGCA CTGCCATTAT TGCGGATATC ATCAGAGCAG CATCAATATA TGTCCGGCCT GTGGTTCTGT ACACATAGAA CAGAAAGGCT TTGGCACTGA AAGGGTAGAG GAAGAACTGA GCCTGGTTTT CCCGGATGCT AAAATTGCCC GGCTGGATGT GGACAGCACA CGTACCAGGA ATGGCCTGCA GCAGCTTATT TCAGATTTTC AGGAAAAGAA AACGGATATC CTTATTGGTA CACAAATGGT GGCCAAAGGA CTTGATTTTG ATAATGTTAC CCTGATCGGG GTAATCAATG CAGATACTTT ACTGAATTAT CCTGATTTCA GGGCCTTTGA ACGGAGTTAC CAGCTGCTCG CACAGGTAGC AGGCAGGGCA GGAAGAAGAG ACAAGCAGGG AAAAGTAATT ATCCAGGCTT ATGACGATTC GCATCGCATC ATCAGACAGG TGATGGAGAA CCAGTATCTC GAAATGTACA AGGACGAACT GGCAGAGCGT CTGCAGTTTC ATTATCCACC ATTTACTAGG CTTATCTTTG TCAATATCAA ACATAAAGAT CAGGACCTGT TAAATATGGC TGCACAGCGT TTTGCAACGA TACTAAGGGC GCAGTTAGGG CCAAGGGTTT TAGGGCCCGA GCAGCCTATG GTGGCCCGGA TCAGGAATTA CTACATTAAG CAGGTAATCA TTAAAACTGA TAAAGATACC TCTGTCCAGA AAGTTAAATC TGTATTAAAA AATACCATCC TCGACTTTCA GTCCGAAAAA GAATACCGTT CCGTAAACAT CCAGGTAGAC GTGGATCCCT ACTAG
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Protein sequence | MAAELLEFSE RETLFVEVIL PLSLAKNYLY RVPFDLNSEV AIGKRVVVQF GKNKIYTALI KTISQTAPRL YQAKYIIDVV DEQPVITTLQ LQLWDWMTGY YLCNEGDVMS AALPTGLKLA SETIIVLKEE ALQEKVLTEK ERILMDALNH QKRLTIADVS ALLGQKTVYP IINTLLEKAL VYVAEEVVEK YRPLLKSFVA LNAFYREEEN LKQLFTILER APKQLNALLT FIKLSRQQNL VSKSQLLEES DCGQAAFKTL LDKEIFTVEK RPVSRLKDND EDFVLNFELS AAQQQALTGI EMEFERKDVV LLHGITASGK TQIYIKLIEK AIEQGGQVLF LLPEIALTTQ IVQRIQRYFG DAIGVYHSKF NNNERVEIWN KVLNGKYRVV LGARSAVFLP FKELKLIVVD EEHESSYKQQ EPSPRYQARD VAVYMAHLHQ AKTVLGSATP SIESYYNAIS QKYGLVTLNE RFGGVELPLH EVVSISEETK KKKMVSYFSG KLIEGISLAL EQKEQVILFQ NRRGYATILI CATCGYAPKC VNCDVSLTYH KTSGKLHCHY CGYHQSSINI CPACGSVHIE QKGFGTERVE EELSLVFPDA KIARLDVDST RTRNGLQQLI SDFQEKKTDI LIGTQMVAKG LDFDNVTLIG VINADTLLNY PDFRAFERSY QLLAQVAGRA GRRDKQGKVI IQAYDDSHRI IRQVMENQYL EMYKDELAER LQFHYPPFTR LIFVNIKHKD QDLLNMAAQR FATILRAQLG PRVLGPEQPM VARIRNYYIK QVIIKTDKDT SVQKVKSVLK NTILDFQSEK EYRSVNIQVD VDPY
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