Gene Phep_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1541 
Symbol 
ID8252643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1828047 
End bp1828958 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content39% 
IMG OID644935195 
Producthistidine kinase internal region 
Protein accessionYP_003091816 
Protein GI255531444 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.441637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCC TGGCTTGTAT CATTCTAAGT AATTTATTGG GCTATTATCA GCCTAAAAAC 
GAAACGATTA TTTTTATCCT GGCACTTACT TTTATCATGG CGCTGTTTAT TACGTTTATG
AGCAAGTTTT TGCTGGTACT GTTTTTTGCA GAAGAAAAAA CATACATGAA TTTTCTAAGT
TTCTCCCTTA CAGTCCGCTT TCTTATTTTA TTTGTGTTTA TAGCCTGGTG CGCCCTGGCT
AACATTTTAT GGTACAGACT GGAAGAACAG TCGGCCACCC AGGAAAGGCT TTTGGCCGCG
CAAAACCTGT CTAAAGAAGC CGAATTAAAT AAACTTCGGC ACCAGTTACA GCCACACTTT
TTATTTAACA GCTTAAACTC GGTATATGCT CTAACGATGG TGAACCCTAA AGAAGCGGGG
ACAATGATTA CCAAACTGGC CTCTTTTTTA CGCGGAACTT TAAAAAGAGA TGACGAGGTT
TGGGTAAGTG TGGCCGAGGA AATGGAATAT ATTGGCCTGT ATCTTGACAT AGAAAAAGTA
CGTTTTAGCC ACAGGTTAAA TATTGATGTG AAAATAGCTG ATAATACTTT AAATTTACGT
TTACCTGGTA CCCTTTTGCA GCCTATAGTG GAAAATGCGA TAAAATTCGG ATTGTATAAT
ACAGCAGCGG CCATCACGAT TTCGCTGGAT GTAAGGTTAC AGCATAACCA TTTGGTCATT
AGGGTGCAAA ATCCATTTGA CCCTGAGTTA AAAGCAACGG GAGGCACCGG TTTTGGCTTA
ACAGCTATAC GGCGAAGGCT ATATCTGTTG TTTGCTGATG AAAGATTGCT CAGAACAGAT
GTGATGGACG AAAATATATT TGTAACTACG CTTAAAATAC CCCAGCAGCA TGATAAGAAC
GATATTAATT GA
 
Protein sequence
MLALACIILS NLLGYYQPKN ETIIFILALT FIMALFITFM SKFLLVLFFA EEKTYMNFLS 
FSLTVRFLIL FVFIAWCALA NILWYRLEEQ SATQERLLAA QNLSKEAELN KLRHQLQPHF
LFNSLNSVYA LTMVNPKEAG TMITKLASFL RGTLKRDDEV WVSVAEEMEY IGLYLDIEKV
RFSHRLNIDV KIADNTLNLR LPGTLLQPIV ENAIKFGLYN TAAAITISLD VRLQHNHLVI
RVQNPFDPEL KATGGTGFGL TAIRRRLYLL FADERLLRTD VMDENIFVTT LKIPQQHDKN
DIN