| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1538 |
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| Symbol | |
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| ID | 8252640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1826074 |
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| End bp | 1826505 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935192 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_003091813 |
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| Protein GI | 255531441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.580363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.302083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGATTTG TAAAAGAATT TAAAGAGTTT GCCATTAAAG GCAGTGTAAT GGATCTCGCT
GTCGGTGTAA TCATTGGTGG TGCATTTGGT AAGATAATCG ACAGTGTTGT CAACGATTTG
GTCATGCCAT TGATCTCAGC AGTGATCGGA TCTGTTGACT TTAGCAATAT GTATGTGGTG
TTAAAAGGAA CTGTAACAGA GGGTATGGCA CTTGTTGATG CCAGAAAGGT ACCTGGTACA
GTCGTATTTG CTTATGGTAA CTTCATAACG GTAGCCATCA ATTTCCTATT ACTGGCATTG
GCTGTGTTTA TGCTGGTTAA AGGAATAAAT TCATTGAAAC GTAAACAGGA GGCTGCTCCT
GCTGCACCAG CGGCACCAAC CCAGGATCAG GTATTGCTCA CAGAGATCAG GGACCTGCTT
AAAACAAAAT AA
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| Protein sequence | MGFVKEFKEF AIKGSVMDLA VGVIIGGAFG KIIDSVVNDL VMPLISAVIG SVDFSNMYVV
LKGTVTEGMA LVDARKVPGT VVFAYGNFIT VAINFLLLAL AVFMLVKGIN SLKRKQEAAP
AAPAAPTQDQ VLLTEIRDLL KTK
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