Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1513 |
Symbol | |
ID | 8252614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1796037 |
End bp | 1796870 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644935167 |
Product | Prephenate dehydratase |
Protein accession | YP_003091789 |
Protein GI | 255531417 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.807541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG TAACAAGAGT AGCAATTCAG GGTATTAAAG CATCTTTCCA CGAAGAGGCG GCCTTCAAGT TTTTTGGAAC AGACATCCAG ACCATAGAAT GCAATTCTTT TAAGCAAACA TGTGAAAGTT TGGAAAAAAA AGAATGTGAT TATGTGATCA TGGCCATAGA AAACTCTATA GCAGGTAGTC TTTTACCAAA TTACACCTTA ATACGCGAAT ATAATTTTGC TGTTGTAGGT GAGGTATACC TGGCTATCCA ATTACATTTA ATGGCTTTAC CAGGTGTTAA ATTTGAAGAT GTGAAATTTG CCACTTCACA CCCTATTGCC ATCCGTCAGT GTGTAGATTT CTTTTATGAT TATCCCCACA TCCAGGTAAT TGAGGGCAAT GATACTGCTG CCTGTGCAAA ACGTATTAAA GACGAGCAGC TAAAAGATAC TGTTGCTATT GCCAATACCC TTGCAGCCGA ATTGTATGGT CTGAATATTA TTGAAAGAAG GATTGAGTCC AATAAAAAGA ATTTTACCCG TTTCCTGATC CTTAAGCTGG ACAAGACCGA AGAGTTGAAA GAAGTTAACA AAGCTTCTAT ATGTTTCCAG GTAGGCAATC ATGTAGGGGC TTTATCCAAA GTTCTGAATA TTTTTGCTGA ACAACAGGTT AACCTCACAA AAATCCAGAG CATGCCTGTC TTAGGGAAAC GTAACGATTA TTACTTCTAT GTTGACATGG AATGGACCAG CATGGAAAAT TACGACAAAG CCGTCCGGCA AGCCTTAAAA TACACTGTAA ACTTTAATAT TATGGGCGAA TACCAGAAAA ACGATAAAGT ATAA
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Protein sequence | MKKVTRVAIQ GIKASFHEEA AFKFFGTDIQ TIECNSFKQT CESLEKKECD YVIMAIENSI AGSLLPNYTL IREYNFAVVG EVYLAIQLHL MALPGVKFED VKFATSHPIA IRQCVDFFYD YPHIQVIEGN DTAACAKRIK DEQLKDTVAI ANTLAAELYG LNIIERRIES NKKNFTRFLI LKLDKTEELK EVNKASICFQ VGNHVGALSK VLNIFAEQQV NLTKIQSMPV LGKRNDYYFY VDMEWTSMEN YDKAVRQALK YTVNFNIMGE YQKNDKV
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