Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1430 |
Symbol | |
ID | 8252530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1698762 |
End bp | 1699892 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644935083 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_003091706 |
Protein GI | 255531334 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.143529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.876583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA ATTTAGCGGC AAAAGATATA CATTCGAAAG CGAGGGCAGG CACAATCACA ACAGACCATG GCGAAATACA GACGCCCATT TTCATGCCTG TTGGCACTGC AGGAACGGTT AAATCGATTA ACCAGCAGCA ACTTAAAAAT GATATTGATG CTAAAATCAT CTTAGGAAAT ACGTATCATT TATATTTAAG ACCTGGTCTC GATATTCTGG AACGCGCAGG CGGTCTACAT CAGTTTATTG GCTGGGACCG TCCGATCCTG ACGGATAGCG GCGGCTATCA GGTGTATTCC TTAAGTAAGG TAAGGAAGAT AAAGGAAGAG GGCGTGACCT TCCGCTCTCA TATAGATGGC TCCAAACACC TTTTTACACC AGAATACGCA ATGGACATTC AGCGTACCAT CGGGGCCGAT ATTATTATGG CCTTCGATGA ATGCACCCCC TATCCATGTG ATTATAAATA CGCAGCAAAC TCCATCAACA TGACCCACAG GTGGCTAAAA CGCTGTTGTA CACGCTTTGA TACCACAACA CCCAAATACG GTTTTGACCA AACCCTGTTT CCTATCGTAC AGGGATCTGT ATACAAAGAC CTGCGCGTAA AATCAGCAGA ATTTATTGCG GCTATGGGCC GGGAAGGTAA CGCCATTGGT GGTCTTTCTG TAGGTGAACC TGCAGAAGAA ATGTATGCCA TGACCGAAGT GGTTTGTGAT ATACTTCCTT ACGAAAAACC ACGTTATTTA ATGGGTGTGG GCACCCCGAT CAACATTTTA GAGAACATTG CCCTCGGTGT AGATATGTTT GATTGTGTGA TGCCAACCAG AAATGCCAGA AATGGCATGC TTTTCACTAA AAATGGGGTC ATCAATATCA GCAATAAAAA ATGGGCCGAT GATTTTTCTC CTATTGAGGC AGAAAGTGAT CTGGTTGCAG ACCAGGTGTA CTCTAAAGCC TATTTAAGAC ATTTAATGCA CTCCAAAGAG ATGCTGGGTG CACAAATTGC AACTTTACAT AACCTCCACT TTTATTTATG GCTGGTTAAA ACTGCCCGTG AAAAAATTAT GAGTGGAGAA TTTTACGCCT GGAAAAACAA AATGGTTACT ATATTAGGTA ATAAATTGTA A
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Protein sequence | MKFNLAAKDI HSKARAGTIT TDHGEIQTPI FMPVGTAGTV KSINQQQLKN DIDAKIILGN TYHLYLRPGL DILERAGGLH QFIGWDRPIL TDSGGYQVYS LSKVRKIKEE GVTFRSHIDG SKHLFTPEYA MDIQRTIGAD IIMAFDECTP YPCDYKYAAN SINMTHRWLK RCCTRFDTTT PKYGFDQTLF PIVQGSVYKD LRVKSAEFIA AMGREGNAIG GLSVGEPAEE MYAMTEVVCD ILPYEKPRYL MGVGTPINIL ENIALGVDMF DCVMPTRNAR NGMLFTKNGV INISNKKWAD DFSPIEAESD LVADQVYSKA YLRHLMHSKE MLGAQIATLH NLHFYLWLVK TAREKIMSGE FYAWKNKMVT ILGNKL
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