| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1422 |
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| Symbol | |
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| ID | 8252522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1689677 |
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| End bp | 1690471 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935075 |
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| Product | thymidylate synthase |
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| Protein accession | YP_003091698 |
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| Protein GI | 255531326 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03284] thymidylate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.54015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAAT ATCTAGATCT GATGCAGCAT GTGCTGGATC ATGGCACACA AAAACACGAC
CGTACCGGAA CCGGAACCAT CAGCGTATTT GGCTACCAGA TGCGTTTTAA CCTGCAGGAA
GGTTTCCCTA TGGTGACCAC TAAAAAACTA CACCTGAAAT CGATCATTCA TGAACTGATC
TGGTTTTTAA GTGGCGATAC CAATATCAAA TACCTGAAAG ATAACGGGGT AAAGATATGG
GACGAATGGG CGGATGAAAA TGGCGACCTT GGACCGGTAT ACGGTTCGCA ATGGCGGTCG
TGGCCAAAAC CCGGTGGTGG TCATATCGAT CAGATTGCGC AGATTGTAAA CACCATTAAA
AACAATCCGG ATTCGAGAAG GATCATTGTT TCGGCATGGA ATGTTGCTGA AGTTGAAAAC
ATGGCCCTAC CACCTTGTCA TGCCTTTTTT CAATTTTATG TGGCCGATGG AAAACTGAGC
TGTCAATTGT ACCAGCGCAG TGCGGATATC TTTTTAGGCG TTCCTTTTAA CATTGCATCT
TATGCCTTAC TGACCATGAT GGTGGCCCAG GTATGTGGCC TTGCTTATGG AGATTTTATC
CATACCCTGG GAGATGCCCA TTTGTACAAT AACCACATTG AACAAACCAG GTTACAGTTG
AGCCGTGAAC CCAGAAAATT ACCGGTCATG GAAATCAATC CTGAAATAAA AGATATATTC
AGTTTCAGCT ATGAAGATTT TACCCTGAAA GATTACGACC CGCATCCACA CATTAAAGGA
GCAGTAGCCG TATGA
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| Protein sequence | MKQYLDLMQH VLDHGTQKHD RTGTGTISVF GYQMRFNLQE GFPMVTTKKL HLKSIIHELI
WFLSGDTNIK YLKDNGVKIW DEWADENGDL GPVYGSQWRS WPKPGGGHID QIAQIVNTIK
NNPDSRRIIV SAWNVAEVEN MALPPCHAFF QFYVADGKLS CQLYQRSADI FLGVPFNIAS
YALLTMMVAQ VCGLAYGDFI HTLGDAHLYN NHIEQTRLQL SREPRKLPVM EINPEIKDIF
SFSYEDFTLK DYDPHPHIKG AVAV
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