Gene Phep_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1421 
Symbol 
ID8252521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1689195 
End bp1689680 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content46% 
IMG OID644935074 
ProductDihydrofolate reductase 
Protein accessionYP_003091697 
Protein GI255531325 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.491047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAT CCATAGTTGT GGCGATTGCC GAAAACAATG CCATCGGCAA AAACAATGAA 
CTGTTGTGGC ACCTGCCTAC AGACCTGAAA CATTTTAAAC AGCTCACCAG CGGGCATACC
ATTATTATGG GCCGCAAAAC CTTTGACTCC ATTGGCAAAC CACTACCCAA CAGACGCAAT
ATTGTAATTA CCCGCTCAAA CAGCCTGGAA ATACCGGGGG CTGAAGTAGT GAACAACATA
GATCAGGCCT TGGCGCTCTG CACAGCCGAA AAAGAGGTTT TTATAGTGGG CGGTGCAGAA
ATTTACAGAC AGGCGATGGA CAAAACGGAT AAGATTTACC TGACCACGGT ACATGCAGGG
TTTGAGGGCG ATGCTTATTT CCCCGAAATT GATCGAAAAA AATGGGAGGA AGTTGATAAT
GAGCCACATC AGCCCGACGA AAAAAACAAC CTTGCTTACA CATTTTCGAC ACTGCTGCGT
AAATAG
 
Protein sequence
MTVSIVVAIA ENNAIGKNNE LLWHLPTDLK HFKQLTSGHT IIMGRKTFDS IGKPLPNRRN 
IVITRSNSLE IPGAEVVNNI DQALALCTAE KEVFIVGGAE IYRQAMDKTD KIYLTTVHAG
FEGDAYFPEI DRKKWEEVDN EPHQPDEKNN LAYTFSTLLR K