Gene Phep_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1363 
Symbol 
ID8252463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1623990 
End bp1625111 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content40% 
IMG OID644935017 
ProductFecR protein 
Protein accessionYP_003091640 
Protein GI255531268 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.864118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG AAGAAATTAT AGCACTTTTA GAAAAGTATA AAACAGCTGA ACTTAGCCCG 
TATGAAAAAT CATTGCTGGA AAGCTGGTAC ATTCAACAGG TAAAGGATAG CAAGCATGAA
ATAGCCGACG AAGATTTAGT TAAAAACTTA CAGCAGATTG GCAAAGTCCT ACCTTTAAAA
CAACAACGTC CTTTTAAAAT AACCTGGTCT AAAGTAGCAG CTGCTGCTGC AATAATTATA
GTTGTAGGTG TTGGGATACA AATTTCAAAA AAGCCCGTTA AAACTGAGCG TTTATCAGAC
AAACTTTACG CAAACAACAT CATTGCAGGC AAGAATTCGG CCACCTTAAC ACTTGCCAAT
GGAAACAGTA TTGTCCTCAG TGACGCAAAA ACAGGAGTGA TAATTGGTGA TGACTTGAGA
TATAATGATA ATACCGCTGT CACTTCGAAC AATACTACCT CAACAGGAAC AACTTCACTT
ATTGAGGCTG AAATGGTCAC CGTGGCGACA CCCCGTGGTG GCACCTACCA GGTAGTTCTA
CCAGACGGCA CCCGTGTTTG GTTAAATGCA GCCTCTTCCA TTAGCTTCCC AACTAATTTT
GAAGGCAATA CCCGTACCGT GTCGCTTACC GGAGAAGCTT ATTTTGAAGT TGCACATAAC
AAATCCATAC CATTTCGTGT AAAAAGTATC AGGCAGGAAA TCGAAGTTTT AGGAACCCAT
TTTAACATTA ACAGTTATGC AGACGAGCCA ACAGTAAAAA CAACTTTGCT GGAAGGAAGT
GTAAGGGTCA TTACCACTGG AAAAGTTCAT AAAGTTATTT TAAAGCCAGG TGAACAGGCA
CTTGTAAAAG ACAATATAAA AGTTGCAGGT ATCAATCCGC AAACTGCAAT AGCGTGGAAA
AACGGTGAAT TTATGTTCAG AAACGAACCA CTGGAAAATA TCATGAGAGC CATCTCCAGA
TGGTATAATG TAGAAGTGAT TTACCAGGCC GATGTTTCTG GCAAGGCAGT ATGGGGCACC
ATAACCAAAT ATGGCAGTGT ATCAGAAGTC CTGGAAATGA TCACCCTTAC CGGAGCTGCA
AATTTTAAAA TAGAAGGCAA AAAAATCATT GTATTACCAT AA
 
Protein sequence
MKDEEIIALL EKYKTAELSP YEKSLLESWY IQQVKDSKHE IADEDLVKNL QQIGKVLPLK 
QQRPFKITWS KVAAAAAIII VVGVGIQISK KPVKTERLSD KLYANNIIAG KNSATLTLAN
GNSIVLSDAK TGVIIGDDLR YNDNTAVTSN NTTSTGTTSL IEAEMVTVAT PRGGTYQVVL
PDGTRVWLNA ASSISFPTNF EGNTRTVSLT GEAYFEVAHN KSIPFRVKSI RQEIEVLGTH
FNINSYADEP TVKTTLLEGS VRVITTGKVH KVILKPGEQA LVKDNIKVAG INPQTAIAWK
NGEFMFRNEP LENIMRAISR WYNVEVIYQA DVSGKAVWGT ITKYGSVSEV LEMITLTGAA
NFKIEGKKII VLP