Gene Phep_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1359 
Symbol 
ID8252459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1616826 
End bp1618145 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content48% 
IMG OID644935013 
ProductNHL repeat containing protein 
Protein accessionYP_003091636 
Protein GI255531264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.666477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA TATCCATCTT TATCATATTG GCCACACTCC TTTTTACATC CTGTAAAAAA 
GAAAGTAAAG CCCCGGTTAC TTCAGCAAAA CTTAAAATCA CTTCCCTATG GCCCGATAAC
GGCCAGGCTG CTATGATCGT AACCATTAAC GGAAAAAACT TCAGCAGCAA CCCTGCAGCC
AACATTGTAA AATTTAATGG TGTAGATGCG GTGGTTATTG AAGCCTCTGC CACACAGTTA
CAGGTAGTAA GCCCTTCAAA TGCAGGTAAC GGAAAGGTAA CCATTACCCT AAACGGGCAA
TCTGCAGAAG GCCCTGTATT TACCTATAAA GCTGCCCCGG CATCAGAATA TATCGTAAGT
ACCTTTGCCG GAGACGGAAC TGCAGGCCTG TTCAACGGCG CTGCTGCCGA TGCTCAATTC
AGAAATCCGG AAGGCCTAGC CGTTGATGCA CAGGGTAACG TTATTGTAGC CGACCGTCAG
AACCATACCA TCAGAAAAAT AAGCCCGGCA GGACAAGTTA CCACCATTGC TGGTGATGGA
ACCGCAGGCT ATGCCGATGG AACAGGAACT GCAGCAAAAT TCAGCTCTCC CTGGAAATTA
GCTATAGATC CGCTGGGAAA TATCATTGTC GCCGACCGTG ATAACTTTAA GATCAGAAAG
ATTGCTCCTG ATGGCGCTGT AACTACACTG GCAGGAAGCA CGGCAGGCTT TGCAGACGGG
ACCGGCAGTG CAGCTAAATT TATGCAGCCA TTGGATGTAG TAGCCGATGC GCAGGGAAAC
ATTTATGTGG CAGACAATAC CGCACACCGC ATCCGGAAAG TAAGCCCATC CGGTACGGTA
ACAACCCTTG CAGGTGATGG CACTGCCGGA TACCTGGATG CTACAGGTGT ACAGGCCAAA
TTCAGAAATC CATCAGGGCT TACCGTCGAT CAGCAAGGAA ACATCATTGT GGCCGACCGG
CTTAACCACC GCATCCGGAA AATAACTCCT GCAGGTACAG TTAGTACTAT TGCCGGTGCA
GGTACAACCG GGTTGTTAGA CGGAGATGCA CTTACTGCAA AATTTGCCGA TCCTTATGGC
GTTGCGGTTG ATGCAGGCGG AAACATTCTT GTAGCGGAAC TGACCAATGC CAGAATCCGA
AAAATTACTC CTGTAGGGCA GGTCAGCACA TTGGCAGGCA GCTCGGCAGG TTTTGCAGAT
GGATTAAGTG TAAACGCGAA ATTCAATCAG CCAACCGATC TTGATATAGA TGCTAAAGGA
AACATCTACG TAGCCGAAGT AACCAACCAT AGGATCCGCA TGATCAGGTT AATCAAATAA
 
Protein sequence
MNRISIFIIL ATLLFTSCKK ESKAPVTSAK LKITSLWPDN GQAAMIVTIN GKNFSSNPAA 
NIVKFNGVDA VVIEASATQL QVVSPSNAGN GKVTITLNGQ SAEGPVFTYK AAPASEYIVS
TFAGDGTAGL FNGAAADAQF RNPEGLAVDA QGNVIVADRQ NHTIRKISPA GQVTTIAGDG
TAGYADGTGT AAKFSSPWKL AIDPLGNIIV ADRDNFKIRK IAPDGAVTTL AGSTAGFADG
TGSAAKFMQP LDVVADAQGN IYVADNTAHR IRKVSPSGTV TTLAGDGTAG YLDATGVQAK
FRNPSGLTVD QQGNIIVADR LNHRIRKITP AGTVSTIAGA GTTGLLDGDA LTAKFADPYG
VAVDAGGNIL VAELTNARIR KITPVGQVST LAGSSAGFAD GLSVNAKFNQ PTDLDIDAKG
NIYVAEVTNH RIRMIRLIK