| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1358 |
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| Symbol | |
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| ID | 8252458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1614874 |
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| End bp | 1616814 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644935012 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_003091635 |
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| Protein GI | 255531263 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.967304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT TTAATCTTAC CATAAGCAGA ACAGCACTGG TTTTTCTTAT TGTTTCTGTC
ATACATTTCA GTTGTACAAA ACAGATTGAT CAGGTCCTGT TAAAAGAGAA ACCGATTCGC
AGTGGATCGG CAGCTGTAAC TACACTGTCC TACTCCAGCC TGACACAAAA ACTGATAGAT
GAAACGAGTC TTATCGGCAC AGTGATTTCA GATGATGAAA TCACTGTTGC GCCAGGTGTA
ACAGAAACAG ATATACATTA TACCGATACC GCCGGCAAAG CCATGCACCT GTTTATTCTG
AAAGTTAACC TCAACGAACC CCAGGTATTC ATGGAAGTAG CTACACCTTT TAATCTTCCG
GCATATGCCA GGCAAACCGT ACCTGCACAG GCGGCCGAAA TTGATACCGC TACCCATATG
GTGATAGCAG GCATAAACGG CGATTTTTTT GATACCAGCA CCGGTATTCC TATGGGTATT
GTACATAAAA ATGGTAGCAT CGTCAAAAGC ACTTTTAATG ACAATACCCT GAAACCCCAG
CAGGCAGTCA GTTTCTTTGG CGTAACAGAA AATAATGTTC CGATTATCGA TTTTAAAAGT
GGTTATGCCG CCCTCAGCAG CCAGCTTTAC AACAGTACTG GCAGCGGAGT AATGCTGGTA
AACAATCATC TTCCTGTTTC ACAACCTTAC ACGGCAATCG ATCCCAGAAC ATCAGTTGGA
TATGATGACA ACGGCATCGT ATATTTTGTA GTAATAGATG GACGAGACGC CCCCTATTCC
AATGGAATGA ACTATGCACA GCTTACCAGT GCTTTTATGG CTTTTAATGT AAAAAATGCT
GTAAACCTGG ACGGCGGCGG CTCCTCTACT TTTATGACCA GAAACCCGGT AACCAATTTA
TTACAGGTAA GGAATCAGCC TTCAGACGGT ACCGCACGTG CCGTTGCCAA TGCCTGGCTG
GTCTATATCA GTAAGGTGCT GGTCAGCAAT TACGCTGGTA CAGGAACTGC CGGCTTAGTG
AACGGAGCTA AAGCCAGTGC CCGTTTCGAT AGCCCCGAAG GTCTTGCTAT TGATGCATCA
GGTAATATGT ACATTGCAGA TAAAAACAAC AATGTGATCC GGAAAATCAC TTCTACCGGA
ACAGTGAGTA CCTTTGCAGG TACCGGAGTG GCGGGCTTTG CAGATGGGGC CGGCAGTATA
GCTAAATTTA ACGGACCATG GAAAGTTGCT GTCGATGCAA CAGGCAATGT ATACGTCGCA
GACAGGGACA ACTTTAAGAT CAGGAAGATC ACTCCGGCAG GTATCGTAAG CACACTTGCC
GGAAGTACAG CCGGTTATGC AGATGGAACA GGGAGTGCCG CTAAGTTTAT GCAACCGCTT
GATGTGGCCA TTGACCCCTC TGGCAACGTA ATTGTGGCCG ACAATACCAG CCACCGCATC
CGCAAAATAA CAGCAGCAGG TGTGGTAACT ACAATTGCCG GAAACGGAAC AGCAGGTTAT
ACCAATGGAA CAGGCACAGC TGCACAATTT AAAAACCCAT CAGGTGTAGA TGTCGACGCA
TCCGGAAATA TTTATGTTGC CGATCGTTTA AACCATCGGA TCAGAAAGAT CACCACATCG
GGAGTAGTCA GTTCCTTAGC TGGCACCGGA ACTTCGGGCA CTACAGATGG CGCGGCTGGT
TCAGCCAAAT TTTCAGACCC TTATGGTGTT ACTGTCGATG TATCCGGAAA TGTGTATGTA
GCAGACCTGA TCAGTTCAAG GATCAGAAAA ATATCATCCG GCCAGGTTAG CACCTTAGCC
GGAACTATAC CTGGTTATCA AAATGGAACA AGCACAATAG CCAAATTCAA TCAGCCTACC
GATCTGGTTA TCCAGGGGTC GAACATCTAT ATAGCAGACC ATTCCAACAA CAGCATCCGT
CTGGTCAAAT TAATCAATTA A
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| Protein sequence | MKYFNLTISR TALVFLIVSV IHFSCTKQID QVLLKEKPIR SGSAAVTTLS YSSLTQKLID
ETSLIGTVIS DDEITVAPGV TETDIHYTDT AGKAMHLFIL KVNLNEPQVF MEVATPFNLP
AYARQTVPAQ AAEIDTATHM VIAGINGDFF DTSTGIPMGI VHKNGSIVKS TFNDNTLKPQ
QAVSFFGVTE NNVPIIDFKS GYAALSSQLY NSTGSGVMLV NNHLPVSQPY TAIDPRTSVG
YDDNGIVYFV VIDGRDAPYS NGMNYAQLTS AFMAFNVKNA VNLDGGGSST FMTRNPVTNL
LQVRNQPSDG TARAVANAWL VYISKVLVSN YAGTGTAGLV NGAKASARFD SPEGLAIDAS
GNMYIADKNN NVIRKITSTG TVSTFAGTGV AGFADGAGSI AKFNGPWKVA VDATGNVYVA
DRDNFKIRKI TPAGIVSTLA GSTAGYADGT GSAAKFMQPL DVAIDPSGNV IVADNTSHRI
RKITAAGVVT TIAGNGTAGY TNGTGTAAQF KNPSGVDVDA SGNIYVADRL NHRIRKITTS
GVVSSLAGTG TSGTTDGAAG SAKFSDPYGV TVDVSGNVYV ADLISSRIRK ISSGQVSTLA
GTIPGYQNGT STIAKFNQPT DLVIQGSNIY IADHSNNSIR LVKLIN
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