| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1354 |
|---|
| Symbol | |
|---|
| ID | 8252454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1610604 |
|---|
| End bp | 1611722 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644935008 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003091631 |
|---|
| Protein GI | 255531259 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC TATTAACGCC ATTGCTTGTA ATCATATGTT ATGTCTCAGC TTCCAGCCAG
TATAAGTTTA CCCTTGATTT CAAAACCAAA ACATTCAATA ATGCAAAAGT TTATTTAAAC
GTTTACAATA ACCAGAGCTT TACCCCAATC AGCAGAGATT CCTTTATTGT TGTAAATGGT
CAACACATTA TTAAAGGAGA GCTGAAACAG CCTAGCAATT TCGCAGATTT CAGTGTTTCA
TATCAGGGAA AAGGAATAGG AACGCGGTTT GTGTTGGATT CCGGTGAAAA TAAAGTAAGC
CTGGACACAC CTGTATTAGT AACTAAAATG TTAACATTAC TTTCCAACGC ACGTGGCCAT
TTTGTTGTTG ATGAATTAGA CAATTTATTC TTAGAAAAGG TCGCTTTATA TAAAGAACCC
ACCCGGATTA ACGGTAATTT GCACATACCG CCCAAACTTA ATGAGCAGAT CAGGCAAGCT
CAGTTAAAAC GACTTCTGTC TTATCCGAAT GACTTTGGCA GCCTACTCTA TCTTTATCGT
ATGAGCCGTA TCGATGCTAA CCCTAAAACA GCAATGGACA TTCTGGTAAT ACTGGAAACC
TTTAGTGAAG AGCTGAAGAA TTCTACTTTA GGAAAGCAGC TTTATGAGAA GGAGACCAAT
CTTATCAATA ACAAAAAGGC CGCTGGCGCG GGCAATAAAG TTCCAATATT TAAAATTAAC
GACTTAAATA ATGATGAATT TAGCAACAGC TCCCTGACTG GCCAGCCCTA TATCATCGTC
TTTTCTGCTA CCTGGTGCGG CCCATGTCAG GAACAGTTGC CAATGTTGAA ACAATTATAT
GAAATCTATA AGCAAAAAGG ATTAAAAGTT ATCTATTTCA ACGATGATGA CAATGTAATC
CGCTGGAAAG AGCATGTATC AAATAATAAA CTTAGCTGGA TAAATGTATC GGAAAGATTG
AAGCCCGCAA AAAGCAAAAT TCCGAGATCT TTTGGTGTAT ATTCTATACC TACATGCCTT
GTAGTGAATA AAAAAGGGAC AATTATTTAT AATTCAGACC AATCAGACCC GGGTTTAAAT
CATATTGAAA ATTTCATTAA AAAAGCTATT AATAACTAA
|
|---|
| Protein sequence | MKKLLTPLLV IICYVSASSQ YKFTLDFKTK TFNNAKVYLN VYNNQSFTPI SRDSFIVVNG
QHIIKGELKQ PSNFADFSVS YQGKGIGTRF VLDSGENKVS LDTPVLVTKM LTLLSNARGH
FVVDELDNLF LEKVALYKEP TRINGNLHIP PKLNEQIRQA QLKRLLSYPN DFGSLLYLYR
MSRIDANPKT AMDILVILET FSEELKNSTL GKQLYEKETN LINNKKAAGA GNKVPIFKIN
DLNNDEFSNS SLTGQPYIIV FSATWCGPCQ EQLPMLKQLY EIYKQKGLKV IYFNDDDNVI
RWKEHVSNNK LSWINVSERL KPAKSKIPRS FGVYSIPTCL VVNKKGTIIY NSDQSDPGLN
HIENFIKKAI NN
|
|---|
| |